RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 TMEM233B4DJY2 109 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 H0YIV9 168 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 KLF11O14901 512 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 LCMT2O60294 686 aaKnown RBP6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 CLDN9O95484 217 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 ESRRBO95718 433 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 TBX6O95947 436 aaPredicted RBP6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 FOLR1P15328 257 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 ITIH1P19827 911 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 GRK2P25098 689 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 ETV5P41161 510 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 HNF4AP41235 474 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 HTR6P50406 440 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 PKNOX1P55347 436 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 ABCE1P61221 599 aaKnown RBP6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 RPS15AP62244 130 aaKnown RBP6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 SNRPNP63162 240 aaKnown RBP6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 OCRLQ01968 901 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 GALNT1Q10472 559 aaPredicted RBP6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 TARDBPQ13148 414 aaKnown RBP eCLIP6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 TUBB3Q13509 450 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 PUM1Q14671 1186 aaKnown RBP eCLIP6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 TLR1Q15399 786 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 GPR19Q15760 415 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 KIF26BQ2KJY2 2108 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 ARL13AQ5H913 290 aaPredicted RBP6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 CFAP157Q5JU67 520 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 TCHHL1Q5QJ38 904 aaPredicted RBP6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 TBCELQ5QJ74 424 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 LIPJQ5W064 366 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 FBXO42Q6P3S6 717 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 RGS9BPQ6ZS82 235 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 TMPRSS7Q7RTY8 843 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 CUZD1Q86UP6 607 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 TMPRSS12Q86WS5 348 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 LAS2Q8IYD9 372 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 RNF175Q8N4F7 328 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 ARHGEF39Q8N4T4 335 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 ARFGAP2Q8N6H7 521 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 MFSD9Q8NBP5 474 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 AGBL5Q8NDL9 886 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 WDR20Q8TBZ3 569 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 CREB3L4Q8TEY5 395 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 PPP4R1Q8TF05 950 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 CKAP2Q8WWK9 683 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 SREK1Q8WXA9 508 aaKnown RBP6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 ZUFSPQ96AP4 578 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 CNDP1Q96KN2 507 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 OR2A5Q96R48 311 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 AIF1LQ9BQI0 150 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 RBCK1Q9BYM8 510 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 SHCBP1LQ9BZQ2 653 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 AICDAQ9GZX7 198 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 NT5DC2Q9H857 520 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 APMAPQ9HDC9 416 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 PDE7BQ9NP56 450 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 MID1IP1Q9NPA3 183 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 OCIAD1Q9NX40 245 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 HAO1Q9UJM8 370 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 ZNF490Q9ULM2 529 aaPredicted RBP6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 SNX7Q9UNH6 387 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 TSC22D4Q9Y3Q8 395 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 LOXL2Q9Y4K0 774 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 NUP210LQ5VU65 1888 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 FER1L5A0AVI2 2057 aa6.72□□□□□ -1.33
CTDSPL2-210ENST00000560834 CCDC187A0A096LP49 1063 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 LOC105369274A0A096LPK9 316 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 LOC102723532A0A0G2JNH3 316 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 EFCAB7A8K855 629 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 B4E171 279 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 TMEM150CB9EJG8 249 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 C4orf51C9J302 202 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 H0YGG7 62 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 TMX2-CTNND1H3BSU7 103 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 AGRPO00253 132 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 FFAR3O14843 346 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 GPR42O15529 346 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 OR1F1O43749 312 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 MED26O95402 600 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 TIAF1O95411 115 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 HSPA4LO95757 839 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 STATHP02808 62 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 ENO1P06733 434 aaKnown RBP6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 CAPN1P07384 714 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 CCL4P13236 92 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 HGFP14210 728 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 GSTM2P28161 218 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 CSTF2P33240 577 aaKnown RBP eCLIP6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 ARL1P40616 181 aaPredicted RBP6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 TSPAN7P41732 249 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 SLC1A6P48664 564 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 ARF3P61204 181 aaPredicted RBP6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 CYP4F2P78329 520 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 MC2RQ01718 297 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 ACY1Q03154 408 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 HYAL2Q12891 473 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 STX3Q13277 289 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 EIF3IQ13347 325 aaKnown RBP6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 LAPTM5Q13571 262 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 ZRSR2Q15696 482 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms