RNA–Protein interactions for RNA: ENST00000560637.5

VPS13C-209, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 1 (best)

Gene VPS13C, Length 3,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-209ENST00000560637 SH3GLB1Q9Y371 365 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 VWA8A3KMH1 1905 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 SAC3D1A6NKF1 404 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 E7ENX8 843 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 ANHXE9PGG2 379 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 MYO1CO00159 1063 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 CLDN4O14493 209 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 PPM1DO15297 605 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 SLC16A5O15375 505 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 PRKNO60260 465 aaPredicted RBP5.24□□□□□ -1.57
VPS13C-209ENST00000560637 NRP2O60462 931 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 RDH16O75452 317 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 CCNDBP1O95273 360 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 KLK3P07288 261 aaPredicted RBP5.24□□□□□ -1.57
VPS13C-209ENST00000560637 CBSLP0DN79 551 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 ATP6V1C1P21283 382 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 CALB2P22676 271 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 AVPR2P30518 371 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 IFNA8P32881 189 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 CBSP35520 551 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 POLR2JP52435 117 aaKnown RBP5.24□□□□□ -1.57
VPS13C-209ENST00000560637 SLC16A1P53985 500 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 GSTM4Q03013 218 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 TAP2Q03519 686 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 SCUBE1Q8IWY4 988 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 TBC1D21Q8IYX1 336 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 DTWD2Q8NBA8 298 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 OR7G3Q8NG95 312 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 OR7A2PQ8NGA2 310 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 ASB11Q8WXH4 323 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 APIPQ96GX9 242 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 RASSF4Q9H2L5 321 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 VCXQ9H320 206 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 ZBTB26Q9HCK0 441 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 NOP53Q9NZM5 478 aaKnown RBP5.24□□□□□ -1.57
VPS13C-209ENST00000560637 ANKMY1Q9P2S6 941 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 PCTPQ9UKL6 214 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 CLCA3PQ9Y6N3 262 aa5.24□□□□□ -1.57
VPS13C-209ENST00000560637 TRIOO75962 3097 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 CEP295Q9C0D2 2601 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 FAM221BA6H8Z2 402 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 POLR1CO15160 346 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-209ENST00000560637 GUCY1B2O75343 617 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 EML2O95834 649 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 IL3P08700 152 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 CERS1P27544 350 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 OTX2P32243 289 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 PSME3P61289 254 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 MRPS35P82673 323 aaKnown RBP5.23□□□□□ -1.57
VPS13C-209ENST00000560637 ZNF155Q12901 538 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-209ENST00000560637 GRIK2Q13002 908 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 SLAMF1Q13291 335 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 ZNF267Q14586 743 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-209ENST00000560637 KRT72Q14CN4 511 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 INAVAQ3KP66 663 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 RFTN2Q52LD8 501 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-209ENST00000560637 FGD3Q5JSP0 725 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 WASHC2DQ5SRD0 308 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 ATAD3BQ5T9A4 648 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 NEK5Q6P3R8 708 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 TIFABQ6ZNK6 161 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 LRRC70Q7Z2Q7 622 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 NUDT13Q86X67 352 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 HPS6Q86YV9 775 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 TRIML2Q8N7C3 387 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 GATSQ8NAP1 163 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 OR10A6Q8NH74 314 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 SMPDL3BQ92485 455 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 ATOH8Q96SQ7 321 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 RAB11FIP5Q9BXF6 653 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 MVB12BQ9H7P6 319 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 PLAC1Q9HBJ0 212 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 TMEM74BQ9NUR3 256 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 ATAD3AQ9NVI7 634 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 GIN1Q9NXP7 522 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 UTS2RQ9UKP6 389 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 COPG1Q9Y678 874 aaKnown RBP5.23□□□□□ -1.57
VPS13C-209ENST00000560637 A0A1B0GTL3 188 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 OR5K4A6NMS3 321 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 BHMG1C9JSJ3 638 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-209ENST00000560637 VILLO15195 856 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 SLC28A2O43868 658 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 LDB3O75112 727 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 ENTPD5O75356 428 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 KCNH1O95259 989 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 EFEMP2O95967 443 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 PRKAR1AP10644 381 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 IDO1P14902 403 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 GLULP15104 373 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 ZNF23P17027 643 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 IL10P22301 178 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 PPP2R1BP30154 601 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 CENPAP49450 140 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 LASP1Q14847 261 aaKnown RBP5.23□□□□□ -1.57
VPS13C-209ENST00000560637 GPR19Q15760 415 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 HSF5Q4G112 596 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-209ENST00000560637 DNAL1Q4LDG9 190 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.23□□□□□ -1.57
VPS13C-209ENST00000560637 NXPE4Q6UWF7 544 aa5.23□□□□□ -1.57
VPS13C-209ENST00000560637 SBSNQ6UWP8 590 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms