RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 VBP1P61758 197 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 OGDHQ02218 1023 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 BMP8AQ7Z5Y6 402 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 TMCO2Q7Z6W1 182 aaPredicted RBP13.06□□□□□ -0.32
TRAF3-208ENST00000560371 CD244Q9BZW8 370 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 NLE1Q9NVX2 485 aaPredicted RBP13.06□□□□□ -0.32
TRAF3-208ENST00000560371 BACE2Q9Y5Z0 518 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 GLOD5A6NK44 160 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 HMGN1P05114 100 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 CREB1P16220 341 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 HNF1BP35680 557 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 ALDH3A2P51648 485 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 RBM20Q5T481 1227 aaKnown RBP13.06□□□□□ -0.32
TRAF3-208ENST00000560371 QSOX2Q6ZRP7 698 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 C17orf62Q9BQA9 187 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 PAAF1Q9BRP4 392 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 XYLT2Q9H1B5 865 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 BRD7Q9NPI1 651 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 LOXHD1Q8IVV2 1947 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 NPIPA5E9PKD4 350 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 SYT16Q17RD7 645 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 CYP27C1Q4G0S4 372 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 ZDHHC14Q8IZN3 488 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 TRPV1Q8NER1 839 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 OR4K14Q8NGD5 310 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 SCAMP4Q969E2 229 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 PDE7BQ9NP56 450 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 NPIPA1Q9UND3 350 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 PCM1Q15154 2024 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 RTTNQ86VV8 2226 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 A0A0X1KG70 313 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 PGRP06401 933 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 C8orf89P0DMQ9 161 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 EDNRBP24530 442 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 DGKQP52824 942 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 SP140Q13342 867 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 OR56A1Q8NGH5 318 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 LRRC46Q96FV0 321 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 RC3H2Q9HBD1 1191 aaKnown RBP13.05□□□□□ -0.32
TRAF3-208ENST00000560371 KCTD3Q9Y597 815 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 SCN9AQ15858 1988 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 NOBOXO60393 691 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 RNGTTO60942 597 aaKnown RBP13.05□□□□□ -0.32
TRAF3-208ENST00000560371 EBLN1P0CF75 366 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 ZNF865P0CJ78 1059 aaPredicted RBP13.05□□□□□ -0.32
TRAF3-208ENST00000560371 ZNF20P17024 532 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 MATN1P21941 496 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 MGME1Q9BQP7 344 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 IL21RQ9HBE5 538 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 GPR34Q9UPC5 381 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 C2orf78A6NCI8 922 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 CAPN5O15484 640 aaPredicted RBP13.05□□□□□ -0.32
TRAF3-208ENST00000560371 VIPR2P41587 438 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 SELENOVP59797 346 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 RAB2AP61019 212 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 DHCR24Q15392 516 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 TMEM198Q66K66 360 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 ZNF676Q8N7Q3 588 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 TNFAIP8L1Q8WVP5 186 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 UFD1Q92890 307 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 GAL3ST1Q99999 423 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 CST11Q9H112 138 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 TNFRSF10BO14763 440 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 H1F0P07305 194 aaKnown RBP13.05□□□□□ -0.32
TRAF3-208ENST00000560371 ANXA8P13928 327 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 TGM7Q96PF1 710 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 PEBP4Q96S96 227 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 CHCHD6Q9BRQ6 235 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 COPS4Q9BT78 406 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 ASPNQ9BXN1 380 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 APOBEC3BQ9UH17 382 aaKnown RBP13.05□□□□□ -0.32
TRAF3-208ENST00000560371 MXD1Q05195 221 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 DUOXA1Q1HG43 343 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRAF3-208ENST00000560371 AMIGO1Q86WK6 493 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 METTL27Q8N6F8 245 aaPredicted RBP13.05□□□□□ -0.32
TRAF3-208ENST00000560371 CD180Q99467 661 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 DKKL1Q9UK85 242 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 PDE10AQ9Y233 779 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 DLGAP4Q9Y2H0 992 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 MAU2Q9Y6X3 613 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 NRXN3Q9Y4C0 1643 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 TTC34A8MYJ7 566 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 IL18R1Q13478 541 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 KCNJ9Q92806 393 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 FTSJ1Q9UET6 329 aa13.05□□□□□ -0.32
TRAF3-208ENST00000560371 BEST1O76090 585 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 ASGR2P07307 311 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 F7P08709 466 aaPredicted RBP13.04□□□□□ -0.32
TRAF3-208ENST00000560371 OR10T2Q8NGX3 314 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 DNAJB9Q9UBS3 223 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 WDR45Q9Y484 360 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 PIAS3Q9Y6X2 628 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 GSRP00390 522 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 FHP07954 510 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 PFKLP17858 780 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 DSC3Q14574 896 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 KLHL26Q53HC5 615 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 TICAM1Q8IUC6 712 aa13.04□□□□□ -0.32
TRAF3-208ENST00000560371 OR6N1Q8NGY5 312 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms