RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 CCR10P46092 362 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 OR1D4P47884 311 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 EMP3P54852 163 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 CYP4F2P78329 520 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 CHIT1Q13231 466 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 DNASE1L3Q13609 305 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 GTF2H2Q13888 395 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 GRM7Q14831 915 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 SLC9A5Q14940 896 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 TBCCQ15814 346 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 TCTE1Q5JU00 501 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 GTF2H2CQ6P1K8 395 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 C19orf48Q6RUI8 117 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 ZYG11AQ6WRX3 759 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 ATG14Q6ZNE5 492 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 TTLL10Q6ZVT0 673 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 ASPGQ86U10 573 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 SRRM1Q8IYB3 904 aaKnown RBP10.88□□□□□ -0.67
SNX1-204ENST00000559061 GPR135Q8IZ08 494 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 RNF175Q8N4F7 328 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 NT5CQ8TCD5 201 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 PROKR1Q8TCW9 393 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 SNRNP27Q8WVK2 155 aaKnown RBP10.88□□□□□ -0.67
SNX1-204ENST00000559061 MR1Q95460 341 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 CLIP3Q96DZ5 547 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 THAP11Q96EK4 314 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 SMIM10Q96HG1 83 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 APOPT1Q96IL0 206 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 CDK15Q96Q40 435 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 CCNL2Q96S94 520 aaPredicted RBP10.88□□□□□ -0.67
SNX1-204ENST00000559061 MESP1Q9BRJ9 268 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 SLC6A16Q9GZN6 736 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 PRORYQ9H606 182 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 CNOT10Q9H9A5 744 aaKnown RBP10.88□□□□□ -0.67
SNX1-204ENST00000559061 OPTCQ9UBM4 332 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 CTSFQ9UBX1 484 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 ZFP69BQ9UJL9 534 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 PADI1Q9ULC6 663 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 PCDHGA6Q9Y5G7 932 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 ATMQ13315 3056 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 NBEAQ8NFP9 2946 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 K7ENP7 123 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 NKX2-8O15522 239 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 MAP3K7O43318 606 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 SPAG7O75391 227 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 UMODP07911 640 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 TSPAN8P19075 237 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 AHRP35869 848 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 ETV4P43268 484 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 PRKAA2P54646 552 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 CDH13P55290 713 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 HERVK_113P63132 956 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 IFFO1Q0D2I5 559 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 MPP2Q14168 576 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 PCLAFQ15004 111 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 NCF4Q15080 339 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 SYT16Q17RD7 645 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 COL28A1Q2UY09 1125 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 KRT71Q3SY84 523 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 NKAIN1Q4KMZ8 207 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 XKR6Q5GH73 641 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 MANEAQ5SRI9 462 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 ZNF678Q5SXM1 525 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 CEP85LQ5SZL2 805 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 YOD1Q5VVQ6 348 aaPredicted RBP10.87□□□□□ -0.67
SNX1-204ENST00000559061 CES4AQ5XG92 561 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 GRHL2Q6ISB3 625 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 INO80CQ6PI98 192 aaPredicted RBP10.87□□□□□ -0.67
SNX1-204ENST00000559061 LRIG3Q6UXM1 1119 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 UBE3DQ7Z6J8 389 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 EXOC3L1Q86VI1 746 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 LAS2Q8IYD9 372 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 IL22RA1Q8N6P7 574 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 ENDOVQ8N8Q3 282 aaKnown RBP10.87□□□□□ -0.67
SNX1-204ENST00000559061 L3MBTL4Q8NA19 623 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 ZCCHC10Q8TBK6 192 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 ADAMTS17Q8TE56 1095 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 N4BP2L2Q92802 583 aaPredicted RBP10.87□□□□□ -0.67
SNX1-204ENST00000559061 L3HYPDHQ96EM0 354 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 PTCD3Q96EY7 689 aaKnown RBP10.87□□□□□ -0.67
SNX1-204ENST00000559061 AIF1LQ9BQI0 150 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 NDC1Q9BTX1 674 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 ERVK-6Q9BXR3 956 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 RHBGQ9H310 441 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 GSTO2Q9H4Y5 243 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 ACTL8Q9H568 366 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 NT5DC2Q9H857 520 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 TNFRSF12AQ9NP84 129 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 DCDC2Q9UHG0 476 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 SRPK3Q9UPE1 567 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 PLLPQ9Y342 182 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 RNF11Q9Y3C5 154 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 MAU2Q9Y6X3 613 aa10.87□□□□□ -0.67
SNX1-204ENST00000559061 IGLV3-12A0A075B6K2 115 aa10.86□□□□□ -0.67
SNX1-204ENST00000559061 A0A0A6YYC8 382 aaPredicted RBP10.86□□□□□ -0.67
SNX1-204ENST00000559061 VSTM2BA6NLU5 285 aa10.86□□□□□ -0.67
SNX1-204ENST00000559061 I3L1I5 382 aaPredicted RBP10.86□□□□□ -0.67
SNX1-204ENST00000559061 UBFD1O14562 309 aaKnown RBP10.86□□□□□ -0.67
SNX1-204ENST00000559061 RRP8O43159 456 aaKnown RBP10.86□□□□□ -0.67
SNX1-204ENST00000559061 NDUFS4O43181 175 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms