RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 OR9A1PQ8NGU1 263 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 BRIX1Q8TDN6 353 aaKnown RBP8.22□□□□□ -1.09
VRK1-206ENST00000557222 ITLN2Q8WWU7 325 aaPredicted RBP8.22□□□□□ -1.09
VRK1-206ENST00000557222 SMPDL3AQ92484 453 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 HES6Q96HZ4 224 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 MAGEB10Q96LZ2 347 aaPredicted RBP8.22□□□□□ -1.09
VRK1-206ENST00000557222 C10orf90Q96M02 699 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 ZNF778Q96MU6 729 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 PLCD4Q9BRC7 762 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 TUBB6Q9BUF5 446 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 TRIM5Q9C035 493 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 IL22Q9GZX6 179 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 EIF2B3Q9NR50 452 aaKnown RBP8.22□□□□□ -1.09
VRK1-206ENST00000557222 TREX1Q9NSU2 369 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 PTGFRNQ9P2B2 879 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 R3HDM2Q9Y2K5 976 aaKnown RBP8.22□□□□□ -1.09
VRK1-206ENST00000557222 ACTL7BQ9Y614 415 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 CSMD2Q7Z408 3487 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 OR5H15A6NDH6 313 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 H0YGG7 62 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 LIASO43766 372 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 PRAMEF2O60811 474 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 MLYCDO95822 493 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 WDPCPO95876 746 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 ESR1P03372 595 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 EIF2S1P05198 315 aaKnown RBP8.21□□□□□ -1.1
VRK1-206ENST00000557222 HEXBP07686 556 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 ANXA5P08758 320 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 EZRP15311 586 aaKnown RBP8.21□□□□□ -1.1
VRK1-206ENST00000557222 POU3F2P20265 443 aaPredicted RBP8.21□□□□□ -1.1
VRK1-206ENST00000557222 GRIA1P42261 906 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 CASP6P55212 293 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 KCNK10P57789 538 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 ARF3P61204 181 aaPredicted RBP8.21□□□□□ -1.1
VRK1-206ENST00000557222 ABATP80404 500 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 PRDX1Q06830 199 aaKnown RBP8.21□□□□□ -1.1
VRK1-206ENST00000557222 LONRF1Q17RB8 773 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 ZXDCQ2QGD7 858 aaPredicted RBP8.21□□□□□ -1.1
VRK1-206ENST00000557222 KRTCAP3Q53RY4 240 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 ABHD17BQ5VST6 288 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 MRNIPQ6NTE8 343 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 MRGPRGQ86SM5 289 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 SDCCAG8Q86SQ7 713 aaPredicted RBP8.21□□□□□ -1.1
VRK1-206ENST00000557222 PAQR7Q86WK9 346 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 SHISA5Q8N114 240 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 KRT222Q8N1A0 295 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 ARHGEF39Q8N4T4 335 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 METTL27Q8N6F8 245 aaPredicted RBP8.21□□□□□ -1.1
VRK1-206ENST00000557222 CSNK1A1LQ8N752 337 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 FBXO15Q8NCQ5 510 aaPredicted RBP8.21□□□□□ -1.1
VRK1-206ENST00000557222 SKA2Q8WVK7 121 aaPredicted RBP8.21□□□□□ -1.1
VRK1-206ENST00000557222 C8orf44Q96CB5 159 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 CABS1Q96KC9 395 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 IMMP1LQ96LU5 166 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 EBNA1BP2Q99848 306 aaKnown RBP8.21□□□□□ -1.1
VRK1-206ENST00000557222 DPH7Q9BTV6 452 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 YIPF2Q9BWQ6 316 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.21□□□□□ -1.1
VRK1-206ENST00000557222 MRPS30Q9NP92 439 aaKnown RBP8.21□□□□□ -1.1
VRK1-206ENST00000557222 CHRAC1Q9NRG0 131 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 FAM114A2Q9NRY5 505 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 PAK5Q9P286 719 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 KLHL42Q9P2K6 505 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 TRPC4Q9UBN4 977 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 SEC14L3Q9UDX4 400 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 DRG1Q9Y295 367 aaKnown RBP8.21□□□□□ -1.1
VRK1-206ENST00000557222 REXO2Q9Y3B8 237 aaKnown RBP8.21□□□□□ -1.1
VRK1-206ENST00000557222 NFS1Q9Y697 457 aa8.21□□□□□ -1.1
VRK1-206ENST00000557222 SCN2AQ99250 2005 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 TRGV8A0A0C4DH27 118 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 TCRBV7S2A1N4TA0A589 114 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 H0YIG0 161 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 MYO1CO00159 1063 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 CCL21O00585 134 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 FOXS1O43638 330 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 PSIP1O75475 530 aaKnown RBP8.2□□□□□ -1.1
VRK1-206ENST00000557222 UNC5CO95185 931 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 IFNB1P01574 187 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 APRTP07741 180 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 COX6B1P14854 86 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 HRH2P25021 359 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 PSMB5P28074 263 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 MAPK1P28482 360 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 HTR1EP28566 365 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 RPA3P35244 121 aaPredicted RBP8.2□□□□□ -1.1
VRK1-206ENST00000557222 BDKRB1P46663 353 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 AVPR1BP47901 424 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 SMSP52788 366 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 CDK16Q00536 496 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 KIF5AQ12840 1032 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 PCOLCEQ15113 449 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 NDUFA9Q16795 377 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 TYSND1Q2T9J0 566 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 CCSMST1Q4G0I0 132 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 ZNF425Q6IV72 752 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 HIBCHQ6NVY1 386 aaPredicted RBP8.2□□□□□ -1.1
VRK1-206ENST00000557222 H3F3CQ6NXT2 135 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 LRRC8BQ6P9F7 803 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 DRICH1Q6PGQ1 229 aaPredicted RBP8.2□□□□□ -1.1
VRK1-206ENST00000557222 NEK10Q6ZWH5 1172 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms