RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 SLC20A1Q8WUM9 679 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 NSMCE1Q8WV22 266 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 N4BP2L2Q92802 583 aaPredicted RBP4.48□□□□□ -1.69
SCFD1-223ENST00000557076 HDAC10Q969S8 669 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.48□□□□□ -1.692e-9■■■■■ 43.2
SCFD1-223ENST00000557076 TRIM51Q9BSJ1 452 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 CNPY3Q9BT09 278 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 SPATA16Q9BXB7 569 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 UCK2Q9BZX2 261 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 SIX2Q9NPC8 291 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 TXLNGQ9NUQ3 528 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 IL1RAPL1Q9NZN1 696 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 PTGFRNQ9P2B2 879 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 NFKBIL1Q9UBC1 381 aaPredicted RBP4.48□□□□□ -1.69
SCFD1-223ENST00000557076 ACSL5Q9ULC5 683 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 CHKBQ9Y259 395 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 PLEKHA6Q9Y2H5 1048 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 MPDZO75970 2070 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 FAM237BA0A1B0GVD1 139 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 A0A1W2PQ72 361 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 ASPDHA6ND91 283 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 OR5H15A6NDH6 313 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 NPIPA5E9PKD4 350 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 ZSCAN9O15535 394 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-223ENST00000557076 TTI1O43156 1089 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 ABOP16442 354 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 CA4P22748 312 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 NDUFS1P28331 727 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 GABRA4P48169 554 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 LMAN1P49257 510 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 CARSP49589 748 aaKnown RBP4.47□□□□□ -1.69
SCFD1-223ENST00000557076 CTSCP53634 463 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 ARSFP54793 590 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 GYS2P54840 703 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 STX17P56962 302 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 AP2B1P63010 937 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 KRT85P78386 507 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 XRCC4Q13426 336 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 DPYSQ14117 519 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 RBBP7Q16576 425 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 KHDC1Q4VXA5 237 aaKnown RBP4.47□□□□□ -1.69
SCFD1-223ENST00000557076 TAF3Q5VWG9 929 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 TXNRD3NBQ6F5E7 133 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 FAM83HQ6ZRV2 1179 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-223ENST00000557076 NCCRP1Q6ZVX7 275 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-223ENST00000557076 ZNF677Q86XU0 584 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 CDC20BQ86Y33 519 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 TRAPPC5Q8IUR0 188 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 SIAH3Q8IW03 269 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 PHC2Q8IXK0 858 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 ELOA2Q8IYF1 753 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-223ENST00000557076 CMTM4Q8IZR5 234 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 GHDCQ8N2G8 530 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 DNAJC22Q8N4W6 341 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 CPSF7Q8N684 471 aaKnown RBP4.47□□□□□ -1.69
SCFD1-223ENST00000557076 GPR26Q8NDV2 337 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 ACVR1CQ8NER5 493 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 SLC30A5Q8TAD4 765 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 BRIX1Q8TDN6 353 aaKnown RBP4.47□□□□□ -1.69
SCFD1-223ENST00000557076 LCN9Q8WX39 176 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 TMEM158Q8WZ71 300 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 RND1Q92730 232 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 TTC25Q96NG3 672 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 VPS35Q96QK1 796 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 TUBGCP2Q9BSJ2 902 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 NUP85Q9BW27 656 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 STK33Q9BYT3 514 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 POLR1EQ9GZS1 481 aaKnown RBP4.47□□□□□ -1.69
SCFD1-223ENST00000557076 SRMSQ9H3Y6 488 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 TFB2MQ9H5Q4 396 aaKnown RBP4.47□□□□□ -1.69
SCFD1-223ENST00000557076 PCDH9Q9HC56 1237 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 MAGEE1Q9HCI5 957 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 FAM60AQ9NP50 221 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 IMP3Q9NV31 184 aaKnown RBP4.47□□□□□ -1.69
SCFD1-223ENST00000557076 TAS2R14Q9NYV8 317 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 CWC15Q9P013 229 aaKnown RBP4.47□□□□□ -1.69
SCFD1-223ENST00000557076 ADAM22Q9P0K1 906 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 DHCR7Q9UBM7 475 aaKnown RBP4.47□□□□□ -1.69
SCFD1-223ENST00000557076 AMACRQ9UHK6 382 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 TMPRSS11EQ9UL52 423 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 NPIPA1Q9UND3 350 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 PSMD13Q9UNM6 376 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 LUC7L2Q9Y383 392 aaKnown RBP4.47□□□□□ -1.69
SCFD1-223ENST00000557076 L3MBTL1Q9Y468 752 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 HEBP2Q9Y5Z4 205 aa4.47□□□□□ -1.69
SCFD1-223ENST00000557076 CUBNO60494 3623 aa4.46□□□□□ -1.69
SCFD1-223ENST00000557076 NSG1A0A0A6YYJ2 146 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 A0A1B0GX78 115 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 TCRBV5S1A1TA0A578 114 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 NKX2-6A6NCS4 301 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 MGAT4DA6NG13 374 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 C2orf74A8MZ97 194 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 INAFM1C9JVW0 142 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 BTN3A3O00478 584 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 CCP110O43303 1012 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 ARHGEF9O43307 516 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 HCRTR1O43613 425 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 MTX2O75431 263 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 CRLF1O75462 422 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 RAF1P04049 648 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms