RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 CLK4Q9HAZ1 481 aaKnown RBP10.77□□□□□ -0.69
FOXN3-212ENST00000556541 FAM60AQ9NP50 221 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 NMRK1Q9NWW6 199 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 SOHLH2Q9NX45 425 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 ZDHHC2Q9UIJ5 367 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 CLCA2Q9UQC9 943 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 DNAJC15Q9Y5T4 150 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 SPAARA0A1B0GVQ0 90 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 URADA6NGE7 173 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 ANKDD1BA6NHY2 528 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 TRPC5OSA6NMA1 111 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 SLC28A1O00337 649 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 HDAC3O15379 428 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 OR1F1O43749 312 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 LCMT2O60294 686 aaKnown RBP10.76□□□□□ -0.69
FOXN3-212ENST00000556541 SHOX2O60902 331 aaPredicted RBP10.76□□□□□ -0.69
FOXN3-212ENST00000556541 VPS4BO75351 444 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 CSO75390 466 aaKnown RBP10.76□□□□□ -0.69
FOXN3-212ENST00000556541 LYPLA1O75608 230 aaPredicted RBP10.76□□□□□ -0.69
FOXN3-212ENST00000556541 SLC35G6P0C7Q6 338 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 ACPPP15309 386 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 TSPAN8P19075 237 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 PTX3P26022 381 aaPredicted RBP10.76□□□□□ -0.69
FOXN3-212ENST00000556541 CCR10P46092 362 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 PPM1FP49593 454 aaPredicted RBP10.76□□□□□ -0.69
FOXN3-212ENST00000556541 RAB15P59190 212 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 STXBP1P61764 594 aaKnown RBP10.76□□□□□ -0.69
FOXN3-212ENST00000556541 IRX1P78414 480 aaPredicted RBP10.76□□□□□ -0.69
FOXN3-212ENST00000556541 MC2RQ01718 297 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 RGS1Q08116 209 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 FAM53BQ14153 422 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 PUM1Q14671 1186 aaKnown RBP eCLIP10.76□□□□□ -0.69
FOXN3-212ENST00000556541 C16orf72Q14CZ0 275 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 CPSF6Q16630 551 aaKnown RBP eCLIP10.76□□□□□ -0.69
FOXN3-212ENST00000556541 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.76□□□□□ -0.69
FOXN3-212ENST00000556541 XKR7Q5GH72 579 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 SH2D4BQ5SQS7 431 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 HES3Q5TGS1 186 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 DHRS13Q6UX07 377 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 TMPRSS7Q7RTY8 843 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 ERMP1Q7Z2K6 904 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 VN1R5Q7Z5H4 357 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 ADCK2Q7Z695 626 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 B3GNT8Q7Z7M8 397 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 ASPGQ86U10 573 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 WDR75Q8IWA0 830 aaKnown RBP10.76□□□□□ -0.69
FOXN3-212ENST00000556541 FAM20CQ8IXL6 584 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 PARP9Q8IXQ6 854 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.76□□□□□ -0.69
FOXN3-212ENST00000556541 ARHGEF39Q8N4T4 335 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 ZNF781Q8N8C0 355 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 ZNF740Q8NDX6 193 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 HUS1BQ8NHY5 278 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 RERGQ96A58 199 aaPredicted RBP10.76□□□□□ -0.69
FOXN3-212ENST00000556541 ZNF501Q96CX3 271 aaPredicted RBP10.76□□□□□ -0.69
FOXN3-212ENST00000556541 MOCOSQ96EN8 888 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 MVB12AQ96EY5 273 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 CDK15Q96Q40 435 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 TEFMQ96QE5 360 aaKnown RBP10.76□□□□□ -0.69
FOXN3-212ENST00000556541 SERPINI1Q99574 410 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 TNFRSF12AQ9NP84 129 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 DMRT3Q9NQL9 472 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 ABCF3Q9NUQ8 709 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 SRPK3Q9UPE1 567 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 PCDHGA8Q9Y5G5 932 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 PCDHGA3Q9Y5H0 932 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 SLC22A7Q9Y694 548 aa10.76□□□□□ -0.69
FOXN3-212ENST00000556541 KIF26BQ2KJY2 2108 aa10.75□□□□□ -0.69
FOXN3-212ENST00000556541 TCP11X1B4DZS4 312 aa10.75□□□□□ -0.69
FOXN3-212ENST00000556541 H0YGG7 62 aa10.75□□□□□ -0.69
FOXN3-212ENST00000556541 ZNF195O14628 629 aa10.75□□□□□ -0.69
FOXN3-212ENST00000556541 CRCPO75575 148 aa10.75□□□□□ -0.69
FOXN3-212ENST00000556541 RSL1D1O76021 490 aaKnown RBP10.75□□□□□ -0.69
FOXN3-212ENST00000556541 SCELO95171 688 aa10.75□□□□□ -0.69
FOXN3-212ENST00000556541 TBX6O95947 436 aaPredicted RBP10.75□□□□□ -0.69
FOXN3-212ENST00000556541 ONECUT2O95948 504 aa10.75□□□□□ -0.69
FOXN3-212ENST00000556541 HBQ1P09105 142 aa10.75□□□□□ -0.69
FOXN3-212ENST00000556541 SMIM10L1P0DMW3 83 aa10.75□□□□□ -0.69
FOXN3-212ENST00000556541 MPSTP25325 297 aa10.75□□□□□ -0.69
FOXN3-212ENST00000556541 LSP1P33241 339 aa10.75□□□□□ -0.69
FOXN3-212ENST00000556541 ARL1P40616 181 aaPredicted RBP10.75□□□□□ -0.69
FOXN3-212ENST00000556541 FOXA1P55317 472 aa10.75□□□□□ -0.69
FOXN3-212ENST00000556541 ITGA1P56199 1179 aa10.75□□□□□ -0.69
FOXN3-212ENST00000556541 ARF3P61204 181 aaPredicted RBP10.75□□□□□ -0.69
FOXN3-212ENST00000556541 SKP1P63208 163 aa10.75□□□□□ -0.69
FOXN3-212ENST00000556541 TGM3Q08188 693 aa10.75□□□□□ -0.69
FOXN3-212ENST00000556541 HYAL2Q12891 473 aa10.75□□□□□ -0.69
FOXN3-212ENST00000556541 GRM7Q14831 915 aa10.75□□□□□ -0.69
FOXN3-212ENST00000556541 PHF19Q5T6S3 580 aa10.75□□□□□ -0.69
FOXN3-212ENST00000556541 DEPDC1Q5TB30 811 aa10.75□□□□□ -0.69
FOXN3-212ENST00000556541 TTC19Q6DKK2 380 aaPredicted RBP10.75□□□□□ -0.69
FOXN3-212ENST00000556541 CHSY3Q70JA7 882 aa10.75□□□□□ -0.69
FOXN3-212ENST00000556541 MYLK4Q86YV6 388 aaPredicted RBP10.75□□□□□ -0.69
FOXN3-212ENST00000556541 WDR36Q8NI36 951 aaKnown RBP10.75□□□□□ -0.69
FOXN3-212ENST00000556541 TWIST2Q8WVJ9 160 aa10.75□□□□□ -0.69
FOXN3-212ENST00000556541 SLC13A3Q8WWT9 602 aa10.75□□□□□ -0.69
FOXN3-212ENST00000556541 SELENOMQ8WWX9 145 aa10.75□□□□□ -0.69
FOXN3-212ENST00000556541 GAL3ST3Q96A11 431 aa10.75□□□□□ -0.69
FOXN3-212ENST00000556541 C11orf24Q96F05 449 aaPredicted RBP10.75□□□□□ -0.69
FOXN3-212ENST00000556541 CHMP6Q96FZ7 201 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms