RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 METTL6Q8TCB7 284 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 DYDC1Q8WWB3 177 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 SLC13A3Q8WWT9 602 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 CCT6BQ92526 530 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 ZNF285Q96NJ3 590 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 SLC46A1Q96NT5 459 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 NSUN5Q96P11 429 aaKnown RBP7.3□□□□□ -1.24
TDP1-214ENST00000556063 SLC29A3Q9BZD2 475 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 GSTO2Q9H4Y5 243 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 ELOVL6Q9H5J4 265 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 ZBTB26Q9HCK0 441 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 MLXIPLQ9NP71 852 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 MID1IP1Q9NPA3 183 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 PFDN4Q9NQP4 134 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 TXLNGQ9NUQ3 528 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 INTS9Q9NV88 658 aaKnown RBP7.3□□□□□ -1.24
TDP1-214ENST00000556063 NMRK1Q9NWW6 199 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 TRPS1Q9UHF7 1281 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 CDC14AQ9UNH5 594 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 TSC22D4Q9Y3Q8 395 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 PCDHB3Q9Y5E6 796 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 PCDHGA4Q9Y5G9 962 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 TPRP12270 2363 aaKnown RBP7.3□□□□□ -1.24
TDP1-214ENST00000556063 APC2O95996 2303 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 URB1O60287 2271 aaKnown RBP7.29□□□□□ -1.24
TDP1-214ENST00000556063 A0A088AWK7 358 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 LOC105369274A0A096LPK9 316 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 LOC102723532A0A0G2JNH3 316 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 HYKKA2RU49 373 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 OR7A17O14581 309 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 NDUFS4O43181 175 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 CPNE3O75131 537 aaKnown RBP7.29□□□□□ -1.24
TDP1-214ENST00000556063 OR4F21O95013 312 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 HSPA4LO95757 839 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 SERPINA6P08185 405 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 CCNYL3P0C7X3 344 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 PIM1P11309 404 aaPredicted RBP7.29□□□□□ -1.24
TDP1-214ENST00000556063 TSPAN8P19075 237 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 ZNF10P21506 573 aaPredicted RBP7.29□□□□□ -1.24
TDP1-214ENST00000556063 AGXTP21549 392 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 ETV5P41161 510 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 BCL6P41182 706 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 WDR4P57081 412 aaKnown RBP7.29□□□□□ -1.24
TDP1-214ENST00000556063 TRAF3Q13114 568 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 STX3Q13277 289 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 CAMK2BQ13554 666 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 ZRSR2Q15696 482 aaKnown RBP7.29□□□□□ -1.24
TDP1-214ENST00000556063 CHI3L2Q15782 390 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 TMEM35AQ53FP2 167 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 FRG2Q64ET8 278 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 FRMPD2BQ6IN97 320 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 CHSY3Q70JA7 882 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 ABHD13Q7L211 337 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 MARCH9Q86YJ5 346 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 LAS2Q8IYD9 372 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 OR4N4Q8N0Y3 316 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 ZNF740Q8NDX6 193 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 OR7G3Q8NG95 312 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 OR4F6Q8NGB9 312 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 OR52B6Q8NGF0 335 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 PROKR1Q8TCW9 393 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 CLIP3Q96DZ5 547 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 MVB12AQ96EY5 273 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 CMTM7Q96FZ5 175 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 ZNF578Q96N58 590 aaPredicted RBP7.29□□□□□ -1.24
TDP1-214ENST00000556063 FRG2BQ96QU4 278 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 CTRCQ99895 268 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 C17orf62Q9BQA9 187 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 MECRQ9BV79 373 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 ULBP3Q9BZM4 244 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 SPRTNQ9H040 489 aaPredicted RBP7.29□□□□□ -1.24
TDP1-214ENST00000556063 RHBGQ9H310 441 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 ACTR5Q9H9F9 607 aaPredicted RBP7.29□□□□□ -1.24
TDP1-214ENST00000556063 APMAPQ9HDC9 416 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 ENAMQ9NRM1 1142 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 CUTCQ9NTM9 273 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 RNF11Q9Y3C5 154 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 B3GALT1Q9Y5Z6 326 aa7.29□□□□□ -1.24
TDP1-214ENST00000556063 A0A1B0GX78 115 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 FITM1A5D6W6 292 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 CDRT15L2A8MXV6 281 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 STMND1H3BQB6 276 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 FOXE1O00358 373 aaPredicted RBP7.28□□□□□ -1.24
TDP1-214ENST00000556063 FFAR3O14843 346 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 DSCR3O14972 297 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 GPR42O15529 346 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 ZNF749O43361 778 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 LCMT2O60294 686 aaKnown RBP7.28□□□□□ -1.24
TDP1-214ENST00000556063 NRP2O60462 931 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 PRAMEF4O60810 478 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 ULK1O75385 1050 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 STK17BO94768 372 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 KIAA0754O94854 1291 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 CAPN1P07384 714 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 CD63P08962 238 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 UROSP10746 265 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 HSD3B1P14060 373 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 CHN1P15882 459 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 SPINK2P20155 84 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 CD22P20273 847 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms