RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	ZNF182	P17025	639 aa	Predicted RBP	11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	HRH2	P25021	359 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	EMP3	P54852	163 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	TAS2R41	P59536	307 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	RING1	Q06587	406 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	GANAB	Q14697	944 aa	Known RBP	11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	ZNF773	Q6PK81	442 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	TTC29	Q8NA56	475 aa	Predicted RBP	11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	MOSPD2	Q8NHP6	518 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	CD200R1	Q8TD46	325 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	SLC13A3	Q8WWT9	602 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	MYLIP	Q8WY64	445 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	TDRD1	Q9BXT4	1180 aa	Known RBP	11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	TBC1D24	Q9ULP9	559 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	ST14	Q9Y5Y6	855 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	ZNF236	Q9UL36	1845 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	ARHGEF33	A8MVX0	844 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	GNB5	O14775	395 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	DHFR	P00374	187 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	IL7R	P16871	459 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	ITGA2	P17301	1181 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	SPAM1	P38567	509 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	OMP	P47874	163 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	SELPLG	Q14242	412 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	TAF13	Q15543	124 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	PDE12	Q6L8Q7	609 aa	Known RBP	11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	NUDT8	Q8WV74	236 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	KCNJ9	Q92806	393 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	AP2M1	Q96CW1	435 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	FAM83D	Q9H4H8	585 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	SMURF2	Q9HAU4	748 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	SLCO3A1	Q9UIG8	710 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	ASB1	Q9Y576	335 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029		A0A1W2PRG6	482 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	TMX2-CTNND1	H3BSU7	103 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	SLC28A1	O00337	649 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	PITPNM1	O00562	1244 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	KDELR3	O43731	214 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	SERPINB7	O75635	380 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	ATF4	P18848	351 aa	Predicted RBP	11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	PTN	P21246	168 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	CHIT1	Q13231	466 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	PTPRR	Q15256	657 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	XKR7	Q5GH72	579 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	NEK5	Q6P3R8	708 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	BHLHB9	Q6PI77	547 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	GALNTL5	Q7Z4T8	443 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	CXorf40A	Q8TE69	158 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	CASD1	Q96PB1	797 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	TTYH1	Q9H313	450 aa	Predicted RBP	11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	TVP23B	Q9NYZ1	205 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	PHF11	Q9UIL8	331 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	E2F3	O00716	465 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	DFNA5	O60443	496 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	HLA-E	P13747	358 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	MYL9	P24844	172 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	HOXD9	P28356	352 aa	Predicted RBP	11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	SLC6A4	P31645	630 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	HK3	P52790	923 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	SEC13	P55735	322 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	AP1S1	P61966	158 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	11.91	□□□□□ -0.5
TMPO-212	ENST00000556029		Q6ZSR9	355 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	ASB18	Q6ZVZ8	466 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	IQCF2	Q8IXL9	164 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	BEX2	Q9BXY8	128 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	ELAC1	Q9H777	363 aa	Known RBP	11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	BEX1	Q9HBH7	125 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	CCNB1IP1	Q9NPC3	277 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	TDP1	Q9NUW8	608 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	MTRR	Q9UBK8	725 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	STOML2	Q9UJZ1	356 aa		11.91	□□□□□ -0.5
TMPO-212	ENST00000556029	DIDO1	Q9BTC0	2240 aa	Known RBP	11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	SLC35F4	A4IF30	521 aa		11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	GPR39	O43194	453 aa		11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	ADH1C	P00326	375 aa		11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	MAT2A	P31153	395 aa	Known RBP	11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	STAT5A	P42229	794 aa		11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	DGKG	P49619	791 aa		11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	IST1	P53990	364 aa		11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	RPS3A	P61247	264 aa	Known RBP	11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	CACNG1	Q06432	222 aa		11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	SCRN3	Q0VDG4	424 aa		11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	HSPB3	Q12988	150 aa		11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	GPM6B	Q13491	265 aa		11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	PTGR1	Q14914	329 aa		11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	ABRAXAS2	Q15018	415 aa		11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	CHRNA6	Q15825	494 aa		11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	ZNF829	Q3KNS6	432 aa	Predicted RBP	11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	ARSI	Q5FYB1	569 aa		11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	CTSL3P	Q5NE16	218 aa		11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	USP30	Q70CQ3	517 aa		11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	CXXC5	Q7LFL8	322 aa	Known RBP	11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	LIX1	Q8N485	282 aa		11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	CSGALNACT1	Q8TDX6	532 aa		11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	HDAC2	Q92769	488 aa	Known RBP	11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	TRIB3	Q96RU7	358 aa		11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	RBM4B	Q9BQ04	359 aa	Known RBP	11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	RBM4	Q9BWF3	364 aa	Known RBP	11.9	□□□□□ -0.5
TMPO-212	ENST00000556029	NSUN3	Q9H649	340 aa	Known RBP	11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms