RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 ZKSCAN5Q9Y2L8 839 aa13.52□□□□□ -0.25
CHMP4BP1-201ENST00000556017 SPG11Q96JI7 2443 aa13.52□□□□□ -0.25
CHMP4BP1-201ENST00000556017 FAM237BA0A1B0GVD1 139 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 FEZF1A0PJY2 475 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 CTAGE15A4D2H0 777 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 E5RI56 91 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 RDH16O75452 317 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 FGGP02679 453 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 AGAP20933 346 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 SLC1A2P43004 574 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 AVPR1BP47901 424 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 TERF1P54274 439 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 AP2B1P63010 937 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 PTK6Q13882 451 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 OR1C1Q15619 314 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 NDUFA9Q16795 377 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 MINDY4Q4G0A6 757 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 TTC27Q6P3X3 843 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 MTFR2Q6P444 385 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 ADCK2Q7Z695 626 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 CTAGE6Q86UF2 777 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 SLC26A11Q86WA9 606 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 SPPL2CQ8IUH8 684 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 CPNE9Q8IYJ1 553 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 PLPP5Q8NEB5 264 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 OR5T3Q8NGG3 340 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 M1APQ8TC57 530 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 ZNF354BQ96LW1 612 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 KLHL1Q9NR64 748 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 UTP6Q9NYH9 597 aaKnown RBP13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 NEU2Q9Y3R4 380 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 ASB1Q9Y576 335 aa13.51□□□□□ -0.25
CHMP4BP1-201ENST00000556017 ZNF407Q9C0G0 2248 aa13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 ZNF839A8K0R7 811 aa13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 KIF5CO60282 957 aa13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 HAUS5O94927 633 aa13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 SYF2O95926 243 aaKnown RBP13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 B3GALT4O96024 378 aa13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 ENO3P13929 434 aaPredicted RBP13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 COX6B1P14854 86 aa13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 RPS15AP62244 130 aaKnown RBP13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 MPP1Q00013 466 aa13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 HSF1Q00613 529 aa13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 DHX34Q14147 1143 aaKnown RBP13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 SFT2D3Q587I9 215 aa13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 ARMC3Q5W041 872 aa13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 PAPD4Q6PIY7 484 aaKnown RBP13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 UBE2R2Q712K3 238 aaPredicted RBP13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 TXLNBQ8N3L3 684 aa13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 KIF2BQ8N4N8 673 aa13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 AFAP1L2Q8N4X5 818 aa13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 SUN3Q8TAQ9 357 aa13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 ZCCHC10Q8TBK6 192 aa13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 ELP5Q8TE02 316 aa13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 METTL21AQ8WXB1 218 aa13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 ZNF669Q96BR6 464 aaPredicted RBP13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 DMRTA2Q96SC8 542 aa13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 EBNA1BP2Q99848 306 aaKnown RBP13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 TREX2Q9BQ50 279 aaPredicted RBP13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 SGPP1Q9BX95 441 aa13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 RBCK1Q9BYM8 510 aa13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 RUBCNLQ9H714 662 aa13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 TEKT2Q9UIF3 430 aa13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 PDE10AQ9Y233 779 aa13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 MEMO1Q9Y316 297 aa13.5□□□□□ -0.25
CHMP4BP1-201ENST00000556017 ZNF860A6NHJ4 632 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 UQCRHP07919 91 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 NPPBP16860 134 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 GABRB3P28472 473 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 VPS41P49754 854 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 AGTR2P50052 363 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 RIPPLY3P57055 190 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 SLC26A5P58743 744 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 RBPJQ06330 500 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 USP10Q14694 798 aaKnown RBP13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 PHKG1Q16816 387 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 MEP1AQ16819 746 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 LONRF1Q17RB8 773 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 GALNTL5Q7Z4T8 443 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 DOLPP1Q86YN1 238 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 EEF1AKMT1Q8WVE0 214 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 MTFMTQ96DP5 389 aaKnown RBP13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 THAP11Q96EK4 314 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 PEX11GQ96HA9 241 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 SIGLEC10Q96LC7 697 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 AARSD1Q9BTE6 412 aaKnown RBP13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 SARGQ9BW04 601 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 TSGA10Q9BZW7 698 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 SPNS1Q9H2V7 528 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 KCNK13Q9HB14 408 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 CCDC177Q9NQR7 707 aaPredicted RBP13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 C19orf25Q9UFG5 118 aaPredicted RBP13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 NAALAD2Q9Y3Q0 740 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 HRH3Q9Y5N1 445 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 SLC22A7Q9Y694 548 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 EML6Q6ZMW3 1958 aa13.49□□□□□ -0.25
CHMP4BP1-201ENST00000556017 INTS1Q8N201 2190 aaKnown RBP13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 GABRR3A8MPY1 467 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 MAGEB17A8MXT2 336 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 NPIPA5E9PKD4 350 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 201.1 ms