RNA–Protein interactions for RNA: ENST00000555576.5

TUBB3-208, Transcript of tubulin beta 3 class III, human

TSL 4 BASIC

Gene TUBB3, Length 572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBB3-208	ENST00000555576	SYF2	O95926	243 aa	Known RBP	12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	FGG	P02679	453 aa		12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	SNRPB2	P08579	225 aa	Known RBP	12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	COX6B1	P14854	86 aa		12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	PAM	P19021	973 aa		12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	HRH2	P25021	359 aa		12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	COIL	P38432	576 aa	Predicted RBP	12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	CD96	P40200	585 aa		12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	AGTR2	P50052	363 aa		12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	ST13	P50502	369 aa	Known RBP	12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	TIAL1	Q01085	375 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	CTBP1	Q13363	440 aa		12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	DHX34	Q14147	1143 aa	Known RBP	12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	OR1C1	Q15619	314 aa		12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	EXT1	Q16394	746 aa		12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	SPINK14	Q6IE38	97 aa		12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	GSTA5	Q7RTV2	222 aa		12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	CPNE9	Q8IYJ1	553 aa		12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	KCT2	Q8NC54	265 aa		12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	M1AP	Q8TC57	530 aa		12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	THAP11	Q96EK4	314 aa		12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	ZNF354B	Q96LW1	612 aa		12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	GPR21	Q99679	349 aa		12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	CCDC177	Q9NQR7	707 aa	Predicted RBP	12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	ABCF3	Q9NUQ8	709 aa		12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	C19orf25	Q9UFG5	118 aa	Predicted RBP	12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	MEMO1	Q9Y316	297 aa		12.49	□□□□□ -0.41
TUBB3-208	ENST00000555576	EIF3F	O00303	357 aa	Predicted RBP	12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	LCMT2	O60294	686 aa	Known RBP	12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	RDH16	O75452	317 aa		12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	MYBL2	P10244	700 aa		12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	CDC25B	P30305	580 aa		12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	MAGEA3	P43357	314 aa		12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	KIR3DL1	P43629	444 aa		12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	RIPPLY3	P57055	190 aa		12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	TESK1	Q15569	626 aa		12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	TRIP13	Q15645	432 aa	Predicted RBP	12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	MEP1A	Q16819	746 aa		12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	THEMIS2	Q5TEJ8	643 aa		12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	MFSD4B	Q5TF39	518 aa		12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	MBOAT1	Q6ZNC8	495 aa		12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	UBE2R2	Q712K3	238 aa	Predicted RBP	12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	FGD2	Q7Z6J4	655 aa		12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	GAS2L3	Q86XJ1	694 aa		12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	SPPL2C	Q8IUH8	684 aa		12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	AFAP1L2	Q8N4X5	818 aa		12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	ZCCHC10	Q8TBK6	192 aa		12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	TSLP	Q969D9	159 aa		12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	ZNF669	Q96BR6	464 aa	Predicted RBP	12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	MAGED4	Q96JG8	741 aa		12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	RBCK1	Q9BYM8	510 aa		12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	KCNK13	Q9HB14	408 aa		12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	KLHL1	Q9NR64	748 aa		12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	ADAMTS6	Q9UKP5	1117 aa		12.48	□□□□□ -0.41
TUBB3-208	ENST00000555576	FEZF1	A0PJY2	475 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	ADAM10	O14672	748 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	TTI1	O43156	1089 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	ZBTB14	O43829	449 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	CDC123	O75794	336 aa	Predicted RBP	12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	MLN	P12872	115 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	TERF1	P54274	439 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	SLC26A5	P58743	744 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	KRTAP10-9	P60411	292 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	MPP1	Q00013	466 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	USP10	Q14694	798 aa	Known RBP	12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	ABRAXAS2	Q15018	415 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	KRTCAP3	Q53RY4	240 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	SFT2D3	Q587I9	215 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	RNFT1	Q5M7Z0	435 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	ZNF468	Q5VIY5	522 aa	Predicted RBP	12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	TTC27	Q6P3X3	843 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	PAPD4	Q6PIY7	484 aa	Known RBP	12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	ASPG	Q86U10	573 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	SLC26A11	Q86WA9	606 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	ZNF227	Q86WZ6	799 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	LGI4	Q8N135	537 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	CAMKV	Q8NCB2	501 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	PLPP5	Q8NEB5	264 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	OR5T3	Q8NGG3	340 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	ELP5	Q8TE02	316 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	SERPINB12	Q96P63	405 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	OR1F2P	Q96R84	312 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	TREX2	Q9BQ50	279 aa	Predicted RBP	12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	UTP23	Q9BRU9	249 aa	Known RBP	12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	AARSD1	Q9BTE6	412 aa	Known RBP	12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	SARG	Q9BW04	601 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	SGPP1	Q9BX95	441 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	PDE10A	Q9Y233	779 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	NAALAD2	Q9Y3Q0	740 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	NEU2	Q9Y3R4	380 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	SLC22A7	Q9Y694	548 aa		12.47	□□□□□ -0.41
TUBB3-208	ENST00000555576	GTF3C1	Q12789	2109 aa		12.46	□□□□□ -0.41
TUBB3-208	ENST00000555576	CTAGE9	A4FU28	777 aa		12.46	□□□□□ -0.41
TUBB3-208	ENST00000555576	ZNF860	A6NHJ4	632 aa		12.46	□□□□□ -0.41
TUBB3-208	ENST00000555576	GABRR3	A8MPY1	467 aa		12.46	□□□□□ -0.41
TUBB3-208	ENST00000555576	MAGEB17	A8MXT2	336 aa		12.46	□□□□□ -0.41
TUBB3-208	ENST00000555576	NPIPA5	E9PKD4	350 aa		12.46	□□□□□ -0.41
TUBB3-208	ENST00000555576	FAM227A	F5H4B4	570 aa		12.46	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms