RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 CYLC2Q14093 348 aaPredicted RBP2.01□□□□□ -2.09
SRP54-207ENST00000555535 NPTX1Q15818 432 aa2.01□□□□□ -2.09
SRP54-207ENST00000555535 TMEM44Q2T9K0 475 aa2.01□□□□□ -2.09
SRP54-207ENST00000555535 C15orf59Q2T9L4 293 aaPredicted RBP2.01□□□□□ -2.09
SRP54-207ENST00000555535 CYB5D1Q6P9G0 228 aa2.01□□□□□ -2.09
SRP54-207ENST00000555535 CTR9Q6PD62 1173 aa2.01□□□□□ -2.09
SRP54-207ENST00000555535 CPEB2Q7Z5Q1 589 aaKnown RBP2.01□□□□□ -2.09
SRP54-207ENST00000555535 SERINC5Q86VE9 423 aa2.01□□□□□ -2.09
SRP54-207ENST00000555535 MINDY1Q8N5J2 469 aa2.01□□□□□ -2.09
SRP54-207ENST00000555535 GBP7Q8N8V2 638 aaPredicted RBP2.01□□□□□ -2.09
SRP54-207ENST00000555535 ESAMQ96AP7 390 aa2.01□□□□□ -2.09
SRP54-207ENST00000555535 SLC22A18Q96BI1 424 aa2.01□□□□□ -2.09
SRP54-207ENST00000555535 RBM24Q9BX46 236 aaKnown RBP2.01□□□□□ -2.09
SRP54-207ENST00000555535 SYNCQ9H7C4 482 aa2.01□□□□□ -2.09
SRP54-207ENST00000555535 KLK11Q9UBX7 282 aa2.01□□□□□ -2.09
SRP54-207ENST00000555535 TRGV8A0A0C4DH27 118 aa2□□□□□ -2.09
SRP54-207ENST00000555535 A0A1B0GTH9 108 aa2□□□□□ -2.09
SRP54-207ENST00000555535 SNX3O60493 162 aa2□□□□□ -2.09
SRP54-207ENST00000555535 ATP6AP2O75787 350 aa2□□□□□ -2.09
SRP54-207ENST00000555535 ADORA3P0DMS8 318 aa2□□□□□ -2.09
SRP54-207ENST00000555535 ANPEPP15144 967 aa2□□□□□ -2.09
SRP54-207ENST00000555535 GPR183P32249 361 aa2□□□□□ -2.09
SRP54-207ENST00000555535 MATR3P43243 847 aaKnown RBP eCLIP2□□□□□ -2.09
SRP54-207ENST00000555535 POLR2LP62875 67 aaKnown RBP2□□□□□ -2.09
SRP54-207ENST00000555535 NONOQ15233 471 aaKnown RBP eCLIP2□□□□□ -2.09
SRP54-207ENST00000555535 MLF2Q15773 248 aaPredicted RBP2□□□□□ -2.09
SRP54-207ENST00000555535 NHLRC3Q5JS37 347 aa2□□□□□ -2.09
SRP54-207ENST00000555535 FAAH2Q6GMR7 532 aa2□□□□□ -2.09
SRP54-207ENST00000555535 FAM180BQ6P0A1 224 aa2□□□□□ -2.09
SRP54-207ENST00000555535 EMBQ6PCB8 327 aa2□□□□□ -2.09
SRP54-207ENST00000555535 TMUB2Q71RG4 321 aa2□□□□□ -2.09
SRP54-207ENST00000555535 RASGEF1AQ8N9B8 481 aa2□□□□□ -2.09
SRP54-207ENST00000555535 OR9Q2Q8NGE9 314 aa2□□□□□ -2.09
SRP54-207ENST00000555535 KCNE4Q8WWG9 221 aa2□□□□□ -2.09
SRP54-207ENST00000555535 ATL1Q8WXF7 558 aa2□□□□□ -2.09
SRP54-207ENST00000555535 NABP1Q96AH0 204 aa2□□□□□ -2.09
SRP54-207ENST00000555535 MOB3AQ96BX8 217 aa2□□□□□ -2.09
SRP54-207ENST00000555535 TMCO6Q96DC7 493 aa2□□□□□ -2.09
SRP54-207ENST00000555535 NXPE2Q96DL1 559 aa2□□□□□ -2.09
SRP54-207ENST00000555535 ZNF830Q96NB3 372 aaPredicted RBP2□□□□□ -2.09
SRP54-207ENST00000555535 BTBD9Q96Q07 612 aa2□□□□□ -2.09
SRP54-207ENST00000555535 RANBP9Q96S59 729 aa2□□□□□ -2.09
SRP54-207ENST00000555535 NDNQ99608 321 aa2□□□□□ -2.09
SRP54-207ENST00000555535 DNAJC4Q9NNZ3 241 aa2□□□□□ -2.09
SRP54-207ENST00000555535 GSN-AS1Q9NRJ2 163 aa2□□□□□ -2.09
SRP54-207ENST00000555535 OLAHQ9NV23 265 aa2□□□□□ -2.09
SRP54-207ENST00000555535 CRCT1Q9UGL9 99 aa2□□□□□ -2.09
SRP54-207ENST00000555535 SALL1Q9NSC2 1324 aa1.99□□□□□ -2.09
SRP54-207ENST00000555535 EPB41L2O43491 1005 aaKnown RBP1.99□□□□□ -2.09
SRP54-207ENST00000555535 MTRF1O75570 445 aaKnown RBP1.99□□□□□ -2.09
SRP54-207ENST00000555535 GSRP00390 522 aa1.99□□□□□ -2.09
SRP54-207ENST00000555535 QDPRP09417 244 aa1.99□□□□□ -2.09
SRP54-207ENST00000555535 F3P13726 295 aa1.99□□□□□ -2.09
SRP54-207ENST00000555535 EPCAMP16422 314 aa1.99□□□□□ -2.09
SRP54-207ENST00000555535 C4BPBP20851 252 aa1.99□□□□□ -2.09
SRP54-207ENST00000555535 DUTP33316 252 aaKnown RBP1.99□□□□□ -2.09
SRP54-207ENST00000555535 CETN2P41208 172 aa1.99□□□□□ -2.09
SRP54-207ENST00000555535 RIDAP52758 137 aaKnown RBP1.99□□□□□ -2.09
SRP54-207ENST00000555535 BAATQ14032 418 aaPredicted RBP1.99□□□□□ -2.09
SRP54-207ENST00000555535 ZNF506Q5JVG8 444 aa1.99□□□□□ -2.09
SRP54-207ENST00000555535 PAMR1Q6UXH9 720 aa1.99□□□□□ -2.09
SRP54-207ENST00000555535 KIAA1524Q8TCG1 905 aa1.99□□□□□ -2.09
SRP54-207ENST00000555535 PTERQ96BW5 349 aa1.99□□□□□ -2.09
SRP54-207ENST00000555535 FEVQ99581 238 aa1.99□□□□□ -2.09
SRP54-207ENST00000555535 MOB1AQ9H8S9 216 aa1.99□□□□□ -2.09
SRP54-207ENST00000555535 MARCH7Q9H992 704 aa1.99□□□□□ -2.09
SRP54-207ENST00000555535 HAO2Q9NYQ3 351 aa1.99□□□□□ -2.09
SRP54-207ENST00000555535 PILRBQ9UKJ0 227 aa1.99□□□□□ -2.09
SRP54-207ENST00000555535 GTF3C4Q9UKN8 822 aa1.99□□□□□ -2.09
SRP54-207ENST00000555535 HIVEP2P31629 2446 aa1.99□□□□□ -2.09
SRP54-207ENST00000555535 hCG_38984A0A1B0GV85 526 aa1.98□□□□□ -2.09
SRP54-207ENST00000555535 A6NCN8 305 aa1.98□□□□□ -2.09
SRP54-207ENST00000555535 IPO8O15397 1037 aaKnown RBP1.98□□□□□ -2.09
SRP54-207ENST00000555535 TNFSF12O43508 249 aa1.98□□□□□ -2.09
SRP54-207ENST00000555535 ZNF253O75346 499 aa1.98□□□□□ -2.09
SRP54-207ENST00000555535 SAGP10523 405 aaPredicted RBP1.98□□□□□ -2.09
SRP54-207ENST00000555535 CD59P13987 128 aa1.98□□□□□ -2.09
SRP54-207ENST00000555535 HOXD13P35453 343 aa1.98□□□□□ -2.09
SRP54-207ENST00000555535 MATKP42679 507 aa1.98□□□□□ -2.09
SRP54-207ENST00000555535 NAP1L1P55209 391 aaKnown RBP1.98□□□□□ -2.09
SRP54-207ENST00000555535 BTG1P62324 171 aa1.98□□□□□ -2.09
SRP54-207ENST00000555535 LTB4RQ15722 352 aa1.98□□□□□ -2.09
SRP54-207ENST00000555535 TIMM50Q3ZCQ8 353 aa1.98□□□□□ -2.09
SRP54-207ENST00000555535 C6orf163Q5TEZ5 329 aa1.98□□□□□ -2.09
SRP54-207ENST00000555535 VASH2Q86V25 355 aa1.98□□□□□ -2.09
SRP54-207ENST00000555535 PROX1Q92786 737 aa1.98□□□□□ -2.09
SRP54-207ENST00000555535 CASP10Q92851 521 aa1.98□□□□□ -2.09
SRP54-207ENST00000555535 TSACCQ96A04 125 aaPredicted RBP1.98□□□□□ -2.09
SRP54-207ENST00000555535 CPNE1Q99829 537 aa1.98□□□□□ -2.09
SRP54-207ENST00000555535 CHCHD6Q9BRQ6 235 aa1.98□□□□□ -2.09
SRP54-207ENST00000555535 TMX4Q9H1E5 349 aaPredicted RBP1.98□□□□□ -2.09
SRP54-207ENST00000555535 DHRS4-AS1Q9P1J3 65 aa1.98□□□□□ -2.09
SRP54-207ENST00000555535 FBXL4Q9UKA2 621 aa1.98□□□□□ -2.09
SRP54-207ENST00000555535 CPSF3Q9UKF6 684 aaKnown RBP1.98□□□□□ -2.09
SRP54-207ENST00000555535 ZNF346Q9UL40 294 aaKnown RBP1.98□□□□□ -2.09
SRP54-207ENST00000555535 AUP1Q9Y679 476 aa1.98□□□□□ -2.09
SRP54-207ENST00000555535 NPHP3Q7Z494 1330 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 TRAV24A0A0B4J272 114 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 IQCMA0A1B0GVH7 501 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 C9P02748 559 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms