RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	SERPINA12	Q8IW75	414 aa		3.92	□□□□□ -1.78
KTN1-222	ENST00000555506	TDH	Q8IZJ6	230 aa		3.92	□□□□□ -1.78
KTN1-222	ENST00000555506	CLEC1A	Q8NC01	280 aa		3.92	□□□□□ -1.78
KTN1-222	ENST00000555506	OR4C3	Q8NH37	302 aa		3.92	□□□□□ -1.78
KTN1-222	ENST00000555506	SAP25	Q8TEE9	199 aa		3.92	□□□□□ -1.78
KTN1-222	ENST00000555506	HPSE2	Q8WWQ2	592 aa		3.92	□□□□□ -1.78
KTN1-222	ENST00000555506	SENP5	Q96HI0	755 aa	Predicted RBP	3.92	□□□□□ -1.78
KTN1-222	ENST00000555506	TMEM237	Q96Q45	408 aa		3.92	□□□□□ -1.78
KTN1-222	ENST00000555506	NACAP1	Q9BZK3	213 aa		3.92	□□□□□ -1.78
KTN1-222	ENST00000555506	MAGEF1	Q9HAY2	307 aa		3.92	□□□□□ -1.78
KTN1-222	ENST00000555506	PPAN	Q9NQ55	473 aa	Known RBP	3.92	□□□□□ -1.78
KTN1-222	ENST00000555506	INTS9	Q9NV88	658 aa	Known RBP	3.92	□□□□□ -1.78
KTN1-222	ENST00000555506	HMG20B	Q9P0W2	317 aa		3.92	□□□□□ -1.78
KTN1-222	ENST00000555506	IL36A	Q9UHA7	158 aa		3.92	□□□□□ -1.78
KTN1-222	ENST00000555506	IL19	Q9UHD0	177 aa		3.92	□□□□□ -1.78
KTN1-222	ENST00000555506	NSG2	Q9Y328	171 aa		3.92	□□□□□ -1.78
KTN1-222	ENST00000555506	TEX264	Q9Y6I9	313 aa		3.92	□□□□□ -1.78
KTN1-222	ENST00000555506	MAGEB16	A2A368	324 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	ANTXRL	A6NF34	631 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	RTCA	O00442	366 aa	Known RBP	3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	FPGT	O14772	594 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	KLF11	O14901	512 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	NGF	P01138	241 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	RAF1	P04049	648 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	GPI	P06744	558 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	ELAVL4	P26378	380 aa	Known RBP	3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	RPP38	P78345	283 aa	Known RBP	3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	RBBP5	Q15291	538 aa	Known RBP	3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	EXT1	Q16394	746 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	PARP10	Q53GL7	1025 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	ZNF542P	Q5EBM4	170 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	ARMCX4	Q5H9R4	360 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	SLC35E4	Q6ICL7	350 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	SLC16A9	Q7RTY1	509 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	SMIM29	Q86T20	159 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	ZNF410	Q86VK4	478 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	LAX1	Q8IWV1	398 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	MARVELD2	Q8N4S9	558 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	GBP7	Q8N8V2	638 aa	Predicted RBP	3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	OR4C15	Q8NGM1	316 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	CFAP36	Q96G28	342 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	PRAM1	Q96QH2	718 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	SPX	Q9BT56	116 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	THAP2	Q9H0W7	228 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	MMP28	Q9H239	520 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	RPF1	Q9H9Y2	349 aa	Known RBP	3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	ANO10	Q9NW15	660 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	OR6C2	Q9NZP2	312 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	FETUB	Q9UGM5	382 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	ODF2L	Q9ULJ1	636 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	ZNF510	Q9Y2H8	683 aa		3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	TDRKH	Q9Y2W6	561 aa	Known RBP	3.91	□□□□□ -1.78
KTN1-222	ENST00000555506	KIAA1210	Q9ULL0	1709 aa		3.9	□□□□□ -1.78
KTN1-222	ENST00000555506	KIAA1217	Q5T5P2	1943 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	SYCE3	A1L190	88 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	SNURFL	B1AK76	121 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	PRR23D1	E9PI22	279 aa	Predicted RBP	3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	BMPR1B	O00238	502 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	LETM1	O95202	739 aa	Predicted RBP	3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	PRR23D2	P0DMB1	279 aa	Predicted RBP	3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	TYMP	P19971	482 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	PTMS	P20962	102 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	RBMS1	P29558	406 aa	Known RBP	3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	MAGEA11	P43364	429 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	SLC12A3	P55017	1021 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	STARD6	P59095	220 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	BPIFB3	P59826	476 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	FKBP1B	P68106	108 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	SLC3A1	Q07837	685 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	TRIM29	Q14134	588 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	PPA1	Q15181	289 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	KIAA1644	Q3SXP7	199 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	TMEM207	Q6UWW9	146 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	TOM1L2	Q6ZVM7	507 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	KRTAP5-2	Q701N4	177 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	SLC26A9	Q7LBE3	791 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	COX8C	Q7Z4L0	72 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	TMEM126B	Q8IUX1	230 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	SLC37A3	Q8NCC5	494 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	WBP2	Q969T9	261 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	LGALS12	Q96DT0	336 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	DDX50	Q9BQ39	737 aa	Known RBP	3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	PITPNM3	Q9BZ71	974 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	TSPYL1	Q9H0U9	437 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	TNMD	Q9H2S6	317 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	C5orf66	Q9H5L9	145 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	ZNF334	Q9HCZ1	680 aa	Predicted RBP	3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	EXOC1	Q9NV70	894 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	MIS18A	Q9NYP9	233 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	KCNG2	Q9UJ96	466 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	PRDM4	Q9UKN5	801 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	KCNJ14	Q9UNX9	436 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	FOXA2	Q9Y261	457 aa	Predicted RBP	3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	EXOC6B	Q9Y2D4	811 aa		3.9	□□□□□ -1.79
KTN1-222	ENST00000555506	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	TMEM129	A0AVI4	362 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	SLC9B1P1	A6NJY1	282 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	SMIM1	B2RUZ4	78 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506		M0R296	226 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	EXTL3	O43909	919 aa		3.89	□□□□□ -1.79

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