RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 CAPN1P07384 714 aa16.75■□□□□ 0.27
SHOX-204ENST00000554971 HOXB6P17509 224 aaKnown RBP16.75■□□□□ 0.27
SHOX-204ENST00000554971 SLC14A1Q13336 389 aa16.75■□□□□ 0.27
SHOX-204ENST00000554971 CAPRIN1Q14444 709 aaKnown RBP16.75■□□□□ 0.27
SHOX-204ENST00000554971 ELOCQ15369 112 aa16.75■□□□□ 0.27
SHOX-204ENST00000554971 NANOGP8Q6NSW7 305 aa16.75■□□□□ 0.27
SHOX-204ENST00000554971 LETMD1Q6P1Q0 360 aa16.75■□□□□ 0.27
SHOX-204ENST00000554971 IYDQ6PHW0 289 aa16.75■□□□□ 0.27
SHOX-204ENST00000554971 MILR1Q7Z6M3 343 aa16.75■□□□□ 0.27
SHOX-204ENST00000554971 GLB1L3Q8NCI6 653 aaPredicted RBP16.75■□□□□ 0.27
SHOX-204ENST00000554971 TSPAN14Q8NG11 270 aa16.75■□□□□ 0.27
SHOX-204ENST00000554971 DNAJB8Q8NHS0 232 aa16.75■□□□□ 0.27
SHOX-204ENST00000554971 TIMM29Q9BSF4 260 aa16.75■□□□□ 0.27
SHOX-204ENST00000554971 NANOGQ9H9S0 305 aa16.75■□□□□ 0.27
SHOX-204ENST00000554971 ASIC5Q9NY37 505 aa16.75■□□□□ 0.27
SHOX-204ENST00000554971 MAGEL2Q9UJ55 1249 aa16.75■□□□□ 0.27
SHOX-204ENST00000554971 ANAPC2Q9UJX6 822 aa16.75■□□□□ 0.27
SHOX-204ENST00000554971 AURKCQ9UQB9 309 aa16.75■□□□□ 0.27
SHOX-204ENST00000554971 RNF11Q9Y3C5 154 aa16.75■□□□□ 0.27
SHOX-204ENST00000554971 PCDHB3Q9Y5E6 796 aa16.75■□□□□ 0.27
SHOX-204ENST00000554971 PCDHGB2Q9Y5G2 931 aa16.75■□□□□ 0.27
SHOX-204ENST00000554971 KNTC1P50748 2209 aa16.75■□□□□ 0.27
SHOX-204ENST00000554971 H3BNH8 94 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 OR7A17O14581 309 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 LSM1O15116 133 aaKnown RBP16.74■□□□□ 0.27
SHOX-204ENST00000554971 RGS14O43566 566 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 ZNF23P17027 643 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 LIMK1P53667 647 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 ILF3Q12906 894 aaKnown RBP eCLIP16.74■□□□□ 0.27
SHOX-204ENST00000554971 NFE2L1Q14494 772 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 KCTD21Q4G0X4 260 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 PAGE3Q5JUK9 113 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 SFRP1Q8N474 314 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 TNIP2Q8NFZ5 429 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 OR52B6Q8NGF0 335 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 OR8J3Q8NGG0 315 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 CAMK1GQ96NX5 476 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 NTMT1Q9BV86 223 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 IPPKQ9H8X2 491 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 TAAR2Q9P1P5 351 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 TBC1D29Q9UFV1 150 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 CSNK1G3Q9Y6M4 447 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 CACNA1AO00555 2505 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 TCRBV5S2A0A599 114 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 A6NCN8 305 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 AP2A2O94973 939 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 HMOX2P30519 316 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 ACTR1BP42025 376 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 ACTR1AP61163 376 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 RBBP5Q15291 538 aaKnown RBP16.74■□□□□ 0.27
SHOX-204ENST00000554971 ATP6AP1Q15904 470 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 CYP51A1Q16850 503 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 B3GNT6Q6ZMB0 384 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 TAF8Q7Z7C8 310 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 AMZ2Q86W34 360 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 ZBTB2Q8N680 514 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 OR4F6Q8NGB9 312 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 OR2L2Q8NH16 312 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 DNAJB14Q8TBM8 379 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 VPS33AQ96AX1 596 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 TEX37Q96LM6 180 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 ZBTB18Q99592 522 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 CD244Q9BZW8 370 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 CLK4Q9HAZ1 481 aaKnown RBP16.74■□□□□ 0.27
SHOX-204ENST00000554971 FAM8A1Q9UBU6 413 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 TRPS1Q9UHF7 1281 aa16.74■□□□□ 0.27
SHOX-204ENST00000554971 EIF3LQ9Y262 564 aaKnown RBP16.74■□□□□ 0.27
SHOX-204ENST00000554971 SH3BP5O60239 455 aa16.73■□□□□ 0.27
SHOX-204ENST00000554971 CBFA2T3O75081 653 aa16.73■□□□□ 0.27
SHOX-204ENST00000554971 RASAL1O95294 804 aa16.73■□□□□ 0.27
SHOX-204ENST00000554971 EBLN1P0CF75 366 aa16.73■□□□□ 0.27
SHOX-204ENST00000554971 PBLDP30039 288 aaPredicted RBP16.73■□□□□ 0.27
SHOX-204ENST00000554971 DMPKQ09013 629 aa16.73■□□□□ 0.27
SHOX-204ENST00000554971 TRAF3Q13114 568 aa16.73■□□□□ 0.27
SHOX-204ENST00000554971 PWP1Q13610 501 aa16.73■□□□□ 0.27
SHOX-204ENST00000554971 AP5B1Q2VPB7 878 aa16.73■□□□□ 0.27
SHOX-204ENST00000554971 NADK2Q4G0N4 442 aa16.73■□□□□ 0.27
SHOX-204ENST00000554971 CYP20A1Q6UW02 462 aa16.73■□□□□ 0.27
SHOX-204ENST00000554971 TRIM46Q7Z4K8 759 aa16.73■□□□□ 0.27
SHOX-204ENST00000554971 FAM9CQ8IZT9 166 aa16.73■□□□□ 0.27
SHOX-204ENST00000554971 OR4C6Q8NH72 309 aa16.73■□□□□ 0.27
SHOX-204ENST00000554971 PATE1Q8WXA2 126 aa16.73■□□□□ 0.27
SHOX-204ENST00000554971 RMND5BQ96G75 393 aaPredicted RBP16.73■□□□□ 0.27
SHOX-204ENST00000554971 SH3GL1Q99961 368 aa16.73■□□□□ 0.27
SHOX-204ENST00000554971 GSDMCQ9BYG8 508 aa16.73■□□□□ 0.27
SHOX-204ENST00000554971 SLC29A3Q9BZD2 475 aa16.73■□□□□ 0.27
SHOX-204ENST00000554971 RBM38Q9H0Z9 239 aaKnown RBP16.73■□□□□ 0.27
SHOX-204ENST00000554971 OLAHQ9NV23 265 aa16.73■□□□□ 0.27
SHOX-204ENST00000554971 NLGN3Q9NZ94 848 aa16.73■□□□□ 0.27
SHOX-204ENST00000554971 EGFL7Q9UHF1 273 aa16.73■□□□□ 0.27
SHOX-204ENST00000554971 ASB1Q9Y576 335 aa16.73■□□□□ 0.27
SHOX-204ENST00000554971 LY6G6EA0A0G2JKS1 128 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 MGAT4DA6NG13 374 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 TM4SF5O14894 197 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 SIGLEC6O43699 453 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 MYF6P23409 242 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 RPL10P27635 214 aaKnown RBP16.72■□□□□ 0.27
SHOX-204ENST00000554971 IL12AP29459 219 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 FBXO48Q5FWF7 155 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 RBM44Q6ZP01 1051 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms