RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 PLEKHH3Q7Z736 793 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 RASGRP3Q8IV61 690 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 ZNF683Q8IZ20 524 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 BCL7CQ8WUZ0 217 aaPredicted RBP15.14■□□□□ 0.01
SYNE3-203ENST00000554873 ZC3HAV1LQ96H79 300 aaKnown RBP15.14■□□□□ 0.01
SYNE3-203ENST00000554873 PYURFQ96I23 114 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 BARHL1Q9BZE3 327 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 RACGAP1Q9H0H5 632 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 VAPAQ9P0L0 249 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 RIMKLBQ9ULI2 386 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 TNPO3Q9Y5L0 923 aaKnown RBP15.14■□□□□ 0.01
SYNE3-203ENST00000554873 HRH3Q9Y5N1 445 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 UBA6A0AVT1 1052 aaPredicted RBP15.13■□□□□ 0.01
SYNE3-203ENST00000554873 SUPT3HB4E1H0 165 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 IFRD1O00458 451 aaPredicted RBP15.13■□□□□ 0.01
SYNE3-203ENST00000554873 WDPCPO95876 746 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 SERPINA1P01009 418 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 POMCP01189 267 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 PIRTP0C851 137 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 MAP2K3P46734 347 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 RORCP51449 518 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 CRISP3P54108 245 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 CYP4F3Q08477 520 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 LARS2Q15031 903 aaKnown RBP15.13■□□□□ 0.01
SYNE3-203ENST00000554873 MRNIPQ6NTE8 343 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 ZDHHC21Q8IVQ6 265 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 FBXO39Q8N4B4 442 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 TEX26Q8N6G2 289 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 GPR150Q8NGU9 434 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 ZNF431Q8TF32 576 aaPredicted RBP15.13■□□□□ 0.01
SYNE3-203ENST00000554873 ZSWIM3Q96MP5 696 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 AARSD1Q9BTE6 412 aaKnown RBP15.13■□□□□ 0.01
SYNE3-203ENST00000554873 ASPNQ9BXN1 380 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 NUSAP1Q9BXS6 441 aaKnown RBP15.13■□□□□ 0.01
SYNE3-203ENST00000554873 SLC6A15Q9H2J7 730 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 PRDM5Q9NQX1 630 aaPredicted RBP15.13■□□□□ 0.01
SYNE3-203ENST00000554873 KIF17Q9P2E2 1029 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 H0YC42 278 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 AOC2O75106 756 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 HMGN1P05114 100 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 ZP3P21754 424 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 RPS19P39019 145 aaKnown RBP15.13■□□□□ 0.01
SYNE3-203ENST00000554873 MAGEA2P43356 314 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 RUNX1T1Q06455 604 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 SCRN3Q0VDG4 424 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 NPRL3Q12980 569 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 GTF2H3Q13889 308 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 NFE2L1Q14494 772 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.13■□□□□ 0.01
SYNE3-203ENST00000554873 FLYWCH1Q4VC44 716 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 LCN1P1Q5VSP4 162 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 ANKS6Q68DC2 871 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 PAQR3Q6TCH7 311 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 KIAA1191Q96A73 305 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 SGTBQ96EQ0 304 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 PDXPQ96GD0 296 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 ZNF599Q96NL3 588 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 QRFPRQ96P65 431 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 SECISBP2Q96T21 854 aaKnown RBP15.13■□□□□ 0.01
SYNE3-203ENST00000554873 MYOCQ99972 504 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 FNIP2Q9P278 1114 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 ZNF225Q9UK10 706 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 RNF112Q9ULX5 631 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 VPS9D1Q9Y2B5 631 aa15.13■□□□□ 0.01
SYNE3-203ENST00000554873 IFNA7P01567 189 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 FHP07954 510 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 STSP08842 583 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 RHOQP17081 205 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 CACNB2Q08289 660 aaPredicted RBP15.12■□□□□ 0.01
SYNE3-203ENST00000554873 HABP4Q5JVS0 413 aaKnown RBP15.12■□□□□ 0.01
SYNE3-203ENST00000554873 OR2T5Q6IEZ7 315 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 ATCAYQ86WG3 371 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 STX19Q8N4C7 294 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 EFHBQ8N7U6 833 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 VPS37AQ8NEZ2 397 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 OR2T29Q8NH02 315 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 STAG3L4Q8TBR4 150 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 FATE1Q969F0 183 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 MS4A4AQ96JQ5 239 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 HEXA-AS1Q9H8Q6 139 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 POPDC3Q9HBV1 291 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 PDP1Q9P0J1 537 aaPredicted RBP15.12■□□□□ 0.01
SYNE3-203ENST00000554873 ING4Q9UNL4 249 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 PRELID3BQ9Y3B1 194 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 ACTL7AQ9Y615 435 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 KERAO60938 352 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 ECI2O75521 394 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 PGRP06401 933 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 FPR1P21462 350 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 DNAJA1P31689 397 aaKnown RBP15.12■□□□□ 0.01
SYNE3-203ENST00000554873 GPC1P35052 558 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 CLCNKAP51800 687 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 ERVK-21P61565 698 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 CYP4F2P78329 520 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 PLIN5Q00G26 463 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 YWHAHQ04917 246 aaPredicted RBP15.12■□□□□ 0.01
SYNE3-203ENST00000554873 RIPPLY1Q0D2K3 151 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 C10orf62Q5T681 223 aaPredicted RBP15.12■□□□□ 0.01
SYNE3-203ENST00000554873 OVOS1Q6IE37 1185 aa15.12■□□□□ 0.01
SYNE3-203ENST00000554873 MSANTD2Q6P1R3 559 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms