RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 COL26A1Q96A83 441 aa12.28□□□□□ -0.44
MTHFD1-208ENST00000554739 FKBP10Q96AY3 582 aa12.28□□□□□ -0.44
MTHFD1-208ENST00000554739 WDR34Q96EX3 536 aa12.28□□□□□ -0.44
MTHFD1-208ENST00000554739 AIF1LQ9BQI0 150 aa12.28□□□□□ -0.44
MTHFD1-208ENST00000554739 PARD6BQ9BYG5 372 aa12.28□□□□□ -0.44
MTHFD1-208ENST00000554739 EHD1Q9H4M9 534 aa12.28□□□□□ -0.44
MTHFD1-208ENST00000554739 WDR54Q9H977 334 aa12.28□□□□□ -0.44
MTHFD1-208ENST00000554739 PSMC3IPQ9P2W1 217 aaPredicted RBP12.28□□□□□ -0.44
MTHFD1-208ENST00000554739 ZFP69BQ9UJL9 534 aa12.28□□□□□ -0.44
MTHFD1-208ENST00000554739 PADI2Q9Y2J8 665 aa12.28□□□□□ -0.44
MTHFD1-208ENST00000554739 PTRH2Q9Y3E5 179 aaKnown RBP12.28□□□□□ -0.44
MTHFD1-208ENST00000554739 TLN1Q9Y490 2541 aaKnown RBP12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 IGLV3-12A0A075B6K2 115 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 A0A0A6YYC8 382 aaPredicted RBP12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 VSTM2BA6NLU5 285 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 I3L1I5 382 aaPredicted RBP12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 K7EPI3 171 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 ATXN7O15265 892 aaPredicted RBP12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 CCNT2O60583 730 aaKnown RBP12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 WFS1O76024 890 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 UMODP07911 640 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 SBK3P0C264 359 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 SLC35G6P0C7Q6 338 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 CXCR2P25025 360 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 CASP2P42575 452 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 ALDH18A1P54886 795 aaKnown RBP12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 PCDH1Q08174 1060 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 DSG2Q14126 1118 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 DOC2AQ14183 400 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 E2F2Q14209 437 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 SSPNQ14714 243 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 SETDB1Q15047 1291 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 RASA2Q15283 850 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 RBBP5Q15291 538 aaKnown RBP12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 NDUFA9Q16795 377 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 SOWAHCQ53LP3 525 aaPredicted RBP12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 EMBQ6PCB8 327 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 LRRC70Q7Z2Q7 622 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 TDRPQ86YL5 185 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 CYP4X1Q8N118 509 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 AMER3Q8N944 861 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 EXD3Q8N9H8 876 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 SNX31Q8N9S9 440 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 OR9A4Q8NGU2 314 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 NT5CQ8TCD5 201 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 THAP4Q8WY91 577 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 SPSB2Q99619 263 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 MRPL57Q9BQC6 102 aaKnown RBP12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 DRC3Q9H069 523 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 NT5DC2Q9H857 520 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 PPCSQ9HAB8 311 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 COPG2Q9UBF2 871 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 CTSFQ9UBX1 484 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 TBK1Q9UHD2 729 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 ZNF490Q9ULM2 529 aaPredicted RBP12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 POLHQ9Y253 713 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 KCNMB2Q9Y691 235 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 SLC22A7Q9Y694 548 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 PCM1Q15154 2024 aa12.27□□□□□ -0.45
MTHFD1-208ENST00000554739 A0A1W2PPM1 405 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 LRRC14BA6NHZ5 514 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 FOXO6A8MYZ6 492 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 CLGNO14967 610 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 NDUFS4O43181 175 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 NUDT17P0C025 328 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 GFAPP14136 432 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 CD22P20273 847 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 FBLP22087 321 aaKnown RBP12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 FOLR3P41439 243 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 CCR10P46092 362 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 SLCO1A2P46721 670 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 AVPR1BP47901 424 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 HYAL2Q12891 473 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 SLBPQ14493 270 aaKnown RBP eCLIP12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 NAA30Q147X3 362 aaPredicted RBP12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 PCBP2Q15366 365 aaKnown RBP eCLIP12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 TBCCQ15814 346 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 XKR6Q5GH73 641 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 TMIGD1Q6UXZ0 262 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 SH2D5Q6ZV89 423 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 PRSS41Q7RTY9 318 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 LCA5Q86VQ0 697 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 PDSS2Q86YH6 399 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 AFAP1L2Q8N4X5 818 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 TEX9Q8N6V9 391 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 TRPV3Q8NET8 790 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 ACMSDQ8TDX5 336 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 CREB3L4Q8TEY5 395 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 APOBEC4Q8WW27 367 aaKnown RBP12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 CAVIN3Q969G5 261 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 MMABQ96EY8 250 aaPredicted RBP12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 SCYL1Q96KG9 808 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 PITHD1Q9GZP4 211 aaPredicted RBP12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 MRPL46Q9H2W6 279 aaKnown RBP12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 TMEM216Q9P0N5 145 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 CPSF2Q9P2I0 782 aaKnown RBP12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 XPR1Q9UBH6 696 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 OPTCQ9UBM4 332 aa12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 ZNF282Q9UDV7 671 aaPredicted RBP12.26□□□□□ -0.45
MTHFD1-208ENST00000554739 RAB21Q9UL25 225 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms