RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 BPIFA1Q9NP55 256 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 ARFGAP3Q9NP61 516 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 SARS2Q9NP81 518 aaKnown RBP4.06□□□□□ -1.76
VTI1B-203ENST00000554636 IL26Q9NPH9 171 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 SMOXQ9NWM0 555 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 HACD3Q9P035 362 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 IL17CQ9P0M4 197 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 TMEM9Q9P0T7 183 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 PISDQ9UG56 409 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 SLC23A2Q9UGH3 650 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 ADAM21Q9UKJ8 722 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 ZDHHC8Q9ULC8 765 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 PACSIN2Q9UNF0 486 aaPredicted RBP4.06□□□□□ -1.76
VTI1B-203ENST00000554636 R3HDM2Q9Y2K5 976 aaKnown RBP4.06□□□□□ -1.76
VTI1B-203ENST00000554636 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.06□□□□□ -1.76
VTI1B-203ENST00000554636 MN1Q10571 1320 aaPredicted RBP4.05□□□□□ -1.76
VTI1B-203ENST00000554636 KIR2DS5A0A0G2JLQ3 304 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 A0A0G2JNG1 304 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 GLYATL1P3A0A0U1RQE8 302 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 C5orf60A6NFR6 353 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 LILRA5A6NI73 299 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 RHPN2P1A8MT19 583 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 MIF4GDA9UHW6 222 aaKnown RBP4.05□□□□□ -1.76
VTI1B-203ENST00000554636 KIR2DS3K7RE56 304 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 NVLO15381 856 aaKnown RBP4.05□□□□□ -1.76
VTI1B-203ENST00000554636 KLK10O43240 276 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 GRID2O43424 1007 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 BUD23O43709 281 aaKnown RBP4.05□□□□□ -1.76
VTI1B-203ENST00000554636 DUX1O43812 170 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 VEGFDO43915 354 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 SNX2O60749 519 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 ANXA9O76027 345 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 TJP3O95049 919 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 SLC25A14O95258 325 aaPredicted RBP4.05□□□□□ -1.76
VTI1B-203ENST00000554636 METTL18O95568 372 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 PIM1P11309 404 aaPredicted RBP4.05□□□□□ -1.76
VTI1B-203ENST00000554636 CCL4P13236 92 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 F3P13726 295 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 BRAFP15056 766 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 ZNF7P17097 686 aaPredicted RBP4.05□□□□□ -1.76
VTI1B-203ENST00000554636 ALDH4A1P30038 563 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 SLC5A2P31639 672 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 CTSCP53634 463 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 LIMK2P53671 638 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 SOX8P57073 446 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 XIAPP98170 497 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 DMPKQ09013 629 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 KIF5AQ12840 1032 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 SRSF6Q13247 344 aaKnown RBP4.05□□□□□ -1.76
VTI1B-203ENST00000554636 NFATC2Q13469 925 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 TRA2AQ13595 282 aaKnown RBP eCLIP4.05□□□□□ -1.76
VTI1B-203ENST00000554636 PTPRCAPQ14761 206 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 KIR2DS5Q14953 304 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 TAF1AQ15573 450 aaPredicted RBP4.05□□□□□ -1.76
VTI1B-203ENST00000554636 KHDC1LQ5JSQ8 128 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 GPRC6AQ5T6X5 926 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 CCDC181Q5TID7 509 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 ZDHHC20Q5W0Z9 365 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 KCTD11Q693B1 232 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 ITPRIPL1Q6GPH6 555 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 TMEM71Q6P5X7 295 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 IYDQ6PHW0 289 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 DARS2Q6PI48 645 aaKnown RBP4.05□□□□□ -1.76
VTI1B-203ENST00000554636 ABRAXAS1Q6UWZ7 409 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 FAM151BQ6UXP7 276 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 RANBP10Q6VN20 620 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 CHST15Q7LFX5 561 aaPredicted RBP4.05□□□□□ -1.76
VTI1B-203ENST00000554636 GLT6D1Q7Z4J2 308 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 PPP1R32Q7Z5V6 425 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 LRRTM4Q86VH4 590 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 SYCE1Q8N0S2 351 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 UBL4BQ8N7F7 174 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 DDHD1Q8NEL9 900 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 OR4D9Q8NGE8 314 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 SNRNP27Q8WVK2 155 aaKnown RBP4.05□□□□□ -1.76
VTI1B-203ENST00000554636 RFKQ969G6 155 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 TMEM159Q96B96 161 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 SARAFQ96BY9 339 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 RTP4Q96DX8 246 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 HES6Q96HZ4 224 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 OSBPL9Q96SU4 736 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 APOL2Q9BQE5 337 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 TBC1D10AQ9BXI6 508 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 FSD1LQ9BXM9 530 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 DPH1Q9BZG8 443 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 STRADBQ9C0K7 418 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 UCK1Q9HA47 277 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 RDH14Q9HBH5 336 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 SERHLQ9NQF3 203 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 PRDM8Q9NQV8 689 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 EHD3Q9NZN3 535 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 OGFRQ9NZT2 677 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 ZNF624Q9P2J8 865 aaPredicted RBP4.05□□□□□ -1.76
VTI1B-203ENST00000554636 PDP2Q9P2J9 529 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 CPNE7Q9UBL6 633 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 SERTAD3Q9UJW9 196 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 AMFRQ9UKV5 643 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 ARL5AQ9Y689 179 aa4.05□□□□□ -1.76
VTI1B-203ENST00000554636 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.05□□□□□ -1.76
VTI1B-203ENST00000554636 ATMQ13315 3056 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms