RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 ZNF490Q9ULM2 529 aaPredicted RBP9.24□□□□□ -0.93
SIX4-202ENST00000554079 BTAF1O14981 1849 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 BPTFQ12830 3046 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 QSER1Q2KHR3 1735 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 FAM234BA2RU67 622 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 TTLL8A6PVC2 850 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 ZNF670-ZNF695F2Z2N8 137 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 AZIN1O14977 448 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 SLC22A3O75751 556 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 LGI1O95970 557 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 ADRA2AP08913 450 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 CD19P15391 556 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 IL1RNP18510 177 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 MAGEA2P43356 314 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 TKTL1P51854 596 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 EEF1A1P68104 462 aaKnown RBP9.24□□□□□ -0.93
SIX4-202ENST00000554079 EEF1A2Q05639 463 aaKnown RBP9.24□□□□□ -0.93
SIX4-202ENST00000554079 LGALS3BPQ08380 585 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 CAMK2DQ13557 499 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 FGL2Q14314 439 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 SF3A2Q15428 464 aaKnown RBP9.24□□□□□ -0.93
SIX4-202ENST00000554079 DPYSL2Q16555 572 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 EEF1A1P5Q5VTE0 462 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 SLC6A19Q695T7 634 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 OR7E24Q6IFN5 339 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 FRMPD2BQ6IN97 320 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 RGMBQ6NW40 437 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 ASPGQ86U10 573 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 ZFAND4Q86XD8 727 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 CNTN4Q8IWV2 1026 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 SLC34A3Q8N130 599 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 OR2T12Q8NG77 320 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 OR1M1Q8NGA1 313 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 GTF3AQ92664 365 aaKnown RBP9.24□□□□□ -0.93
SIX4-202ENST00000554079 FAM162AQ96A26 154 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 ULK4Q96C45 1275 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 MRPS24Q96EL2 167 aaKnown RBP9.24□□□□□ -0.93
SIX4-202ENST00000554079 C11orf24Q96F05 449 aaPredicted RBP9.24□□□□□ -0.93
SIX4-202ENST00000554079 COQ10AQ96MF6 247 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 SLC38A2Q96QD8 506 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 MED18Q9BUE0 208 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 PTDSS2Q9BVG9 487 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 PRR14Q9BWN1 585 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 B3GAT2Q9NPZ5 323 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 DCAF13Q9NV06 445 aaKnown RBP9.24□□□□□ -0.93
SIX4-202ENST00000554079 PRMT7Q9NVM4 692 aaPredicted RBP9.24□□□□□ -0.93
SIX4-202ENST00000554079 GPR83Q9NYM4 423 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 TAS2R16Q9NYV7 291 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 HCN3Q9P1Z3 774 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 FAM198AQ9UFP1 575 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 PHF11Q9UIL8 331 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 ZNF222Q9UK12 451 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 FBXL2Q9UKC9 423 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 LRFN2Q9ULH4 789 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 SAMHD1Q9Y3Z3 626 aaKnown RBP9.24□□□□□ -0.93
SIX4-202ENST00000554079 PCDHGB7Q9Y5F8 929 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 STYXL1Q9Y6J8 313 aa9.24□□□□□ -0.93
SIX4-202ENST00000554079 ADAMTSL1Q8N6G6 1762 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 PRAMEF33A0A0G2JMD5 474 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 A0A1W2PQL4 384 aaPredicted RBP9.23□□□□□ -0.93
SIX4-202ENST00000554079 DBX1A6NMT0 343 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 G3V3Q6 166 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 CXCR6O00574 342 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 ACKR2O00590 384 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 PDCD5O14737 125 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 GSTA4O15217 222 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 MED7O43513 233 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 MFSD11O43934 449 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 PRAMEF10O60809 474 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 SCELO95171 688 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 RLN2P04090 185 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 LINC00032P0C843 101 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 HAPLN1P10915 354 aaPredicted RBP9.23□□□□□ -0.93
SIX4-202ENST00000554079 PRF1P14222 555 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 PTPRAP18433 802 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 STOMP27105 288 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 APEX1P27695 318 aaKnown RBP9.23□□□□□ -0.93
SIX4-202ENST00000554079 HOXA6P31267 233 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 HOXC13P31276 330 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 KCNJ5P48544 419 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 SOX10P56693 466 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 YWHAHQ04917 246 aaPredicted RBP9.23□□□□□ -0.93
SIX4-202ENST00000554079 EIF4HQ15056 248 aaKnown RBP9.23□□□□□ -0.93
SIX4-202ENST00000554079 PAN3Q58A45 887 aaKnown RBP9.23□□□□□ -0.93
SIX4-202ENST00000554079 TRIQKQ629K1 86 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 VASNQ6EMK4 673 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 NAPEPLDQ6IQ20 393 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 PYHIN1Q6K0P9 492 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 ALKBH2Q6NS38 261 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 FUT10Q6P4F1 479 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 NLRC3Q7RTR2 1065 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 GPR149Q86SP6 731 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 LUZP2Q86TE4 346 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 PSTKQ8IV42 348 aaKnown RBP9.23□□□□□ -0.93
SIX4-202ENST00000554079 SLC44A2Q8IWA5 706 aaPredicted RBP9.23□□□□□ -0.93
SIX4-202ENST00000554079 DENND6AQ8IWF6 608 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 TBC1D19Q8N5T2 526 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 C19orf18Q8NEA5 215 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 ATP6V1C2Q8NEY4 427 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 DMBX1Q8NFW5 382 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms