RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 BCL6P41182 706 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 TSFMP43897 325 aaKnown RBP13.88□□□□□ -0.19
SHMT2-210ENST00000553950 LSSP48449 732 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 HTR6P50406 440 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 MEF2AQ02078 507 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-210ENST00000553950 ACY1Q03154 408 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 CYP4F3Q08477 520 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 CUL3Q13618 768 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 ABRAXAS2Q15018 415 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 FCRL6Q6DN72 434 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 EPGNQ6UW88 154 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 ATG14Q6ZNE5 492 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 USP53Q70EK8 1073 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 CHSY3Q70JA7 882 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 FAM9CQ8IZT9 166 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 CEP70Q8NHQ1 597 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 NT5CQ8TCD5 201 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 ZNF473Q8WTR7 871 aaKnown RBP13.88□□□□□ -0.19
SHMT2-210ENST00000553950 KLHL6Q8WZ60 621 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 TUBGCP3Q96CW5 907 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 ELAC2Q9BQ52 826 aaKnown RBP13.88□□□□□ -0.19
SHMT2-210ENST00000553950 TMEM120AQ9BXJ8 343 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 TCF7L2Q9NQB0 619 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 AHSPQ9NZD4 102 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 VPS29Q9UBQ0 182 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 KLHL3Q9UH77 587 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 DCTN4Q9UJW0 460 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 PILRAQ9UKJ1 303 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 PLCL2Q9UPR0 1127 aa13.88□□□□□ -0.19
SHMT2-210ENST00000553950 COL27A1Q8IZC6 1860 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-210ENST00000553950 IGHV5-51A0A0C4DH38 117 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 NDUFS4O43181 175 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 GDF9O60383 454 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 NELFEP18615 380 aaKnown RBP13.87□□□□□ -0.19
SHMT2-210ENST00000553950 SERPINB3P29508 390 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 CCKBRP32239 447 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 RAP1GDS1P52306 607 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 CBX1P83916 185 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 TRIP6Q15654 476 aaKnown RBP13.87□□□□□ -0.19
SHMT2-210ENST00000553950 SGO1Q5FBB7 561 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 TCHHL1Q5QJ38 904 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-210ENST00000553950 METTL21CQ5VZV1 264 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 OGFOD2Q6N063 350 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 CGB2Q6NT52 195 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 PAGE2Q7Z2X7 111 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 SLITRK4Q8IW52 837 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 FAM20CQ8IXL6 584 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 D2HGDHQ8N465 521 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 ZNF740Q8NDX6 193 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 OR8K5Q8NH50 307 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 C10orf82Q8WW14 230 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 CCDC74BQ96LY2 380 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 RILPQ96NA2 401 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 QRFPRQ96P65 431 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 MTERF1Q99551 399 aaKnown RBP13.87□□□□□ -0.19
SHMT2-210ENST00000553950 MS4A8Q9BY19 250 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 ACPTQ9BZG2 426 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 STRADBQ9C0K7 418 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 ROGDIQ9GZN7 287 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 SPNS1Q9H2V7 528 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 TUBB1Q9H4B7 451 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 C1orf109Q9NX04 203 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 CDV3Q9UKY7 258 aaKnown RBP13.87□□□□□ -0.19
SHMT2-210ENST00000553950 ATXN7L1Q9ULK2 861 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-210ENST00000553950 SLC12A4Q9UP95 1085 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 ARL2BPQ9Y2Y0 163 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 PCNX2A6NKB5 2137 aa13.87□□□□□ -0.19
SHMT2-210ENST00000553950 A0A0J9YVX5 310 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 IGHV5-10-1A0A0J9YXX1 117 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 MAGEB17A8MXT2 336 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 SDHDO14521 159 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 ZNF195O14628 629 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 CTSVO60911 334 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 DCTN3O75935 186 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 MYO1DO94832 1006 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 LINC00032P0C843 101 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 LBPP18428 481 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 GSTM5P46439 218 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 EMP3P54852 163 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 RPS13P62277 151 aaKnown RBP13.86□□□□□ -0.19
SHMT2-210ENST00000553950 ERVK-8P63133 956 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 YBX1P67809 324 aaKnown RBP13.86□□□□□ -0.19
SHMT2-210ENST00000553950 CYP4F2P78329 520 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 CFHR1Q03591 330 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 ACSM2AQ08AH3 577 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 NDUFA9Q16795 377 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 SPDYAQ5MJ70 313 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 SNAP47Q5SQN1 464 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 PHF19Q5T6S3 580 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 GARNL3Q5VVW2 1013 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 KHDRBS2Q5VWX1 349 aaKnown RBP13.86□□□□□ -0.19
SHMT2-210ENST00000553950 ACSM2BQ68CK6 577 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 NXNQ6DKJ4 435 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 TRIM40Q6P9F5 258 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 ABHD13Q7L211 337 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 ARHGAP22Q7Z5H3 698 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 SPATA19Q7Z5L4 167 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 PIGWQ7Z7B1 504 aa13.86□□□□□ -0.19
SHMT2-210ENST00000553950 BPHLQ86WA6 291 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-210ENST00000553950 ZFAND4Q86XD8 727 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms