RNA–Protein interactions for RNA: ENST00000550831.7

TMEM116-213, Transcript of transmembrane protein 116, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM116, Length 1,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-213ENST00000550831 PCOLCE2Q9UKZ9 415 aa8.83□□□□□ -1
TMEM116-213ENST00000550831 MMP17Q9ULZ9 603 aa8.83□□□□□ -1
TMEM116-213ENST00000550831 SH2B3Q9UQQ2 575 aa8.83□□□□□ -1
TMEM116-213ENST00000550831 OR1A2Q9Y585 309 aa8.83□□□□□ -1
TMEM116-213ENST00000550831 HEBP2Q9Y5Z4 205 aa8.83□□□□□ -1
TMEM116-213ENST00000550831 CROCCQ5TZA2 2017 aa8.83□□□□□ -1
TMEM116-213ENST00000550831 NUMA1Q14980 2115 aa8.83□□□□□ -1
TMEM116-213ENST00000550831 C2CD4DB7Z1M9 353 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 CACNB4O00305 520 aaPredicted RBP8.82□□□□□ -1
TMEM116-213ENST00000550831 RNASET2O00584 256 aaKnown RBP8.82□□□□□ -1
TMEM116-213ENST00000550831 LATO43561 262 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 PRICKLE3O43900 615 aaPredicted RBP8.82□□□□□ -1
TMEM116-213ENST00000550831 KDM1AO60341 852 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 APBB3O95704 486 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 ANXA4P09525 319 aaPredicted RBP8.82□□□□□ -1
TMEM116-213ENST00000550831 RAP2AP10114 183 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 OXTRP30559 389 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 PKLRP30613 574 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 HPCAL1P37235 193 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 RAB28P51157 221 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 ATXN3P54252 364 aaPredicted RBP8.82□□□□□ -1
TMEM116-213ENST00000550831 MTPNP58546 118 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 YPEL5P62699 121 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 FOLH1Q04609 750 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 ZNF763Q0D2J5 394 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 SMAD4Q13485 552 aaKnown RBP8.82□□□□□ -1
TMEM116-213ENST00000550831 CCINQ13939 588 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 MLF2Q15773 248 aaPredicted RBP8.82□□□□□ -1
TMEM116-213ENST00000550831 CYP51A1Q16850 503 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 UAP1L1Q3KQV9 507 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 PLA2G4EQ3MJ16 856 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 OR4F3Q6IEY1 312 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 FAM71E1Q6IPT2 247 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 ERICH5Q6P6B1 374 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 DOK6Q6PKX4 331 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 ABRAXAS1Q6UWZ7 409 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 ARMCX6Q7L4S7 300 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 VN1R5Q7Z5H4 357 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 R3HCC1LQ7Z5L2 792 aaKnown RBP8.82□□□□□ -1
TMEM116-213ENST00000550831 C17orf64Q86WR6 236 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 MICU2Q8IYU8 434 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 RNF175Q8N4F7 328 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 C1orf52Q8N6N3 182 aaKnown RBP8.82□□□□□ -1
TMEM116-213ENST00000550831 NATD1Q8N6N6 113 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 OR2L8Q8NGY9 312 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 CLHC1Q8NHS4 586 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 NUDT8Q8WV74 236 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 N4BP2L2Q92802 583 aaPredicted RBP8.82□□□□□ -1
TMEM116-213ENST00000550831 EME1Q96AY2 570 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 CAMK1GQ96NX5 476 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 INSM2Q96T92 566 aaPredicted RBP8.82□□□□□ -1
TMEM116-213ENST00000550831 SPSB2Q99619 263 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 USB1Q9BQ65 265 aaKnown RBP8.82□□□□□ -1
TMEM116-213ENST00000550831 AIF1LQ9BQI0 150 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 C9orf16Q9BUW7 83 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 OSBPL11Q9BXB4 747 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 REXO4Q9GZR2 422 aaKnown RBP8.82□□□□□ -1
TMEM116-213ENST00000550831 CHRDQ9H2X0 955 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 IKZF5Q9H5V7 419 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 MAGIXQ9H6Y5 334 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 KIR3DX1Q9H7L2 352 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 YY1AP1Q9H869 796 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 KCNK12Q9HB15 430 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 SLC2A4RGQ9NR83 387 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 TM7SF3Q9NS93 570 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.82□□□□□ -1
TMEM116-213ENST00000550831 ADAM29Q9UKF5 820 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 CORO2BQ9UQ03 480 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 DOCK9Q9BZ29 2069 aa8.82□□□□□ -1
TMEM116-213ENST00000550831 TBC1D3DA0A087WVF3 549 aa8.81□□□□□ -1
TMEM116-213ENST00000550831 TBC1D3IA0A087WXS9 549 aa8.81□□□□□ -1
TMEM116-213ENST00000550831 TBC1D3EA0A087X179 549 aa8.81□□□□□ -1
TMEM116-213ENST00000550831 TBC1D3KA0A087X1G2 549 aa8.81□□□□□ -1
TMEM116-213ENST00000550831 C1orf226A1L170 272 aa8.81□□□□□ -1
TMEM116-213ENST00000550831 TBC1D3FA6NER0 549 aaPredicted RBP8.81□□□□□ -1
TMEM116-213ENST00000550831 GABRR3A8MPY1 467 aa8.81□□□□□ -1
TMEM116-213ENST00000550831 TBC1D3LB9A6J9 549 aa8.81□□□□□ -1
TMEM116-213ENST00000550831 RFXANKO14593 260 aa8.81□□□□□ -1
TMEM116-213ENST00000550831 PCDH7O60245 1069 aa8.81□□□□□ -1
TMEM116-213ENST00000550831 GMNNO75496 209 aa8.81□□□□□ -1
TMEM116-213ENST00000550831 TIPRLO75663 272 aa8.81□□□□□ -1
TMEM116-213ENST00000550831 SMNDC1O75940 238 aaKnown RBP eCLIP8.81□□□□□ -1
TMEM116-213ENST00000550831 KLHL18O94889 574 aa8.81□□□□□ -1
TMEM116-213ENST00000550831 TBX6O95947 436 aaPredicted RBP8.81□□□□□ -1
TMEM116-213ENST00000550831 LYNP07948 512 aa8.81□□□□□ -1
TMEM116-213ENST00000550831 TBC1D3HP0C7X1 549 aa8.81□□□□□ -1
TMEM116-213ENST00000550831 MTHFD1P11586 935 aaKnown RBP8.81□□□□□ -1
TMEM116-213ENST00000550831 PCNAP12004 261 aa8.81□□□□□ -1
TMEM116-213ENST00000550831 COX7A2P14406 83 aa8.81□□□□□ -1
TMEM116-213ENST00000550831 NDUFS1P28331 727 aa8.81□□□□□ -1
TMEM116-213ENST00000550831 CCR8P51685 355 aa8.81□□□□□ -1
TMEM116-213ENST00000550831 ABATP80404 500 aa8.81□□□□□ -1
TMEM116-213ENST00000550831 TXNL4AP83876 142 aaKnown RBP8.81□□□□□ -1
TMEM116-213ENST00000550831 PRKCQQ04759 706 aa8.81□□□□□ -1
TMEM116-213ENST00000550831 PRDX1Q06830 199 aaKnown RBP8.81□□□□□ -1
TMEM116-213ENST00000550831 VEZF1Q14119 521 aa8.81□□□□□ -1
TMEM116-213ENST00000550831 NFATC4Q14934 902 aa8.81□□□□□ -1
TMEM116-213ENST00000550831 SMAD2Q15796 467 aaKnown RBP8.81□□□□□ -1
TMEM116-213ENST00000550831 LRRC36Q1X8D7 754 aa8.81□□□□□ -1
TMEM116-213ENST00000550831 TMTC4Q5T4D3 741 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms