RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 ZNF451Q9Y4E5 1061 aa16.36■□□□□ 0.21
CHMP1A-208ENST00000550102 NBASA2RRP1 2371 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 FFAR3O14843 346 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 GPR42O15529 346 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 LCMT2O60294 686 aaKnown RBP16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 PDGFAP04085 211 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 ACPPP15309 386 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 IL1RNP18510 177 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 GNAZP19086 355 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 CASRP41180 1078 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 RGS1Q08116 209 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 CDC16Q13042 620 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 AIMP2Q13155 320 aaKnown RBP16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 BMPR2Q13873 1038 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 TUBB8Q3ZCM7 444 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 VWA2Q5GFL6 755 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 VWA5B1Q5TIE3 1220 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 NXPE4Q6UWF7 544 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 PRSS41Q7RTY9 318 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 ZC3H7AQ8IWR0 971 aaKnown RBP16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 TEX19Q8NA77 164 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 PDPRQ8NCN5 879 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 ZNF740Q8NDX6 193 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 EXT2Q93063 718 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 MACROD1Q9BQ69 325 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 TMEM79Q9BSE2 394 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 NUDT9Q9BW91 350 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 FUT8Q9BYC5 575 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 TGIF2Q9GZN2 237 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 ALG9Q9H6U8 611 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 NMRAL1Q9HBL8 299 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 ANKHQ9HCJ1 492 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 CD274Q9NZQ7 290 aa16.35■□□□□ 0.21
CHMP1A-208ENST00000550102 A0A087X1B8 175 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 IDSB3KWA1 339 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 MAP2K7O14733 419 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 KLHL41O60662 606 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 ALPPP05187 535 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 LTA4HP09960 611 aaKnown RBP16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 TFEBP19484 476 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 AHRP35869 848 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 GMPRP36959 345 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 SCTRP47872 440 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 SERPINB8P50452 374 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 SNRPNP63162 240 aaKnown RBP16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 SKP1P63208 163 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 PWP1Q13610 501 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 RAPSNQ13702 412 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 MYBPC3Q14896 1274 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 HERC3Q15034 1050 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 C18orf21Q32NC0 220 aaPredicted RBP16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 UBAP2Q5T6F2 1119 aaKnown RBP16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 MROH9Q5TGP6 573 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 SULT1C3Q6IMI6 304 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 KIRREL2Q6UWL6 708 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 TAOK1Q7L7X3 1001 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 HPS6Q86YV9 775 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 GALNT16Q8N428 558 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 KCT2Q8NC54 265 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 OR11G2Q8NGC1 345 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 EPN3Q9H201 632 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 SPNS1Q9H2V7 528 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 ATP13A2Q9NQ11 1180 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 SNX15Q9NRS6 342 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 DNAJC11Q9NVH1 559 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 NUDT4Q9NZJ9 180 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 ZFP69BQ9UJL9 534 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 ACOT9Q9Y305 439 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 SLC22A7Q9Y694 548 aa16.34■□□□□ 0.21
CHMP1A-208ENST00000550102 SCN2AQ99250 2005 aa16.33■□□□□ 0.21
CHMP1A-208ENST00000550102 SUPT3HB4E1H0 165 aa16.33■□□□□ 0.2
CHMP1A-208ENST00000550102 PCDH17O14917 1159 aa16.33■□□□□ 0.2
CHMP1A-208ENST00000550102 KERAO60938 352 aa16.33■□□□□ 0.2
CHMP1A-208ENST00000550102 SUPT3HO75486 399 aa16.33■□□□□ 0.2
CHMP1A-208ENST00000550102 KLHL18O94889 574 aa16.33■□□□□ 0.2
CHMP1A-208ENST00000550102 SERPIND1P05546 499 aa16.33■□□□□ 0.2
CHMP1A-208ENST00000550102 INHBAP08476 426 aa16.33■□□□□ 0.2
CHMP1A-208ENST00000550102 GGT5P36269 586 aa16.33■□□□□ 0.2
CHMP1A-208ENST00000550102 GDF5P43026 501 aa16.33■□□□□ 0.2
CHMP1A-208ENST00000550102 EMP2P54851 167 aa16.33■□□□□ 0.2
CHMP1A-208ENST00000550102 MAT1AQ00266 395 aaKnown RBP16.33■□□□□ 0.2
CHMP1A-208ENST00000550102 SYT16Q17RD7 645 aa16.33■□□□□ 0.2
CHMP1A-208ENST00000550102 IFT20Q8IY31 132 aa16.33■□□□□ 0.2
CHMP1A-208ENST00000550102 TRPV3Q8NET8 790 aa16.33■□□□□ 0.2
CHMP1A-208ENST00000550102 STAG3L4Q8TBR4 150 aa16.33■□□□□ 0.2
CHMP1A-208ENST00000550102 NT5CQ8TCD5 201 aa16.33■□□□□ 0.2
CHMP1A-208ENST00000550102 SLC44A1Q8WWI5 657 aa16.33■□□□□ 0.2
CHMP1A-208ENST00000550102 SMAD5Q99717 465 aaKnown RBP16.33■□□□□ 0.2
CHMP1A-208ENST00000550102 CAPS2Q9BXY5 557 aa16.33■□□□□ 0.2
CHMP1A-208ENST00000550102 TRIM4Q9C037 500 aa16.33■□□□□ 0.2
CHMP1A-208ENST00000550102 IGSF5Q9NSI5 407 aa16.33■□□□□ 0.2
CHMP1A-208ENST00000550102 GPRC5BQ9NZH0 403 aa16.33■□□□□ 0.2
CHMP1A-208ENST00000550102 HCN3Q9P1Z3 774 aa16.33■□□□□ 0.2
CHMP1A-208ENST00000550102 IKBKGQ9Y6K9 419 aa16.33■□□□□ 0.2
CHMP1A-208ENST00000550102 HMX2A2RU54 273 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 SGK494L7N484 410 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 TAPBPO15533 448 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 DPM1O60762 260 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 ALOX12BO75342 701 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 RDH16O75452 317 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms