RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 SVOPLQ8N434 492 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 CSGALNACT1Q8TDX6 532 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 TRMT2BQ96GJ1 504 aaKnown RBP13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 APOL4Q9BPW4 351 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 SLC35A5Q9BS91 424 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 RAD18Q9NS91 495 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 ADPRHL2Q9NX46 363 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 TMEFF2Q9UIK5 374 aaPredicted RBP13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 FEZF1A0PJY2 475 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 SH3PXD2BA1X283 911 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 ZSCAN9O15535 394 aaPredicted RBP13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 CLPXO76031 633 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 APOL3O95236 402 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 JUPP14923 745 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 CD36P16671 472 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 LAG3P18627 525 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 CLK3P49761 638 aaKnown RBP13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 ST13P50502 369 aaKnown RBP13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 RGS21Q2M5E4 152 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 RPS26P11Q5JNZ5 115 aaPredicted RBP13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 LAIR1Q6GTX8 287 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 ZNF783Q6ZMS7 281 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 MMAAQ8IVH4 418 aaKnown RBP13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 DOK4Q8TEW6 326 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 HDAC2Q92769 488 aaKnown RBP13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 DACH2Q96NX9 599 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 SLC29A3Q9BZD2 475 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 TPRKBQ9Y3C4 175 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 DYRK1BQ9Y463 629 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 CTSLP07711 333 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 EPCAMP16422 314 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 GP2P55259 537 aaKnown RBP13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 HBA1P69905 142 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 INAQ16352 499 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 P2RY8Q86VZ1 359 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 EXOSC8Q96B26 276 aaKnown RBP13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 CHCHD6Q9BRQ6 235 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 SPNS1Q9H2V7 528 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 TPK1Q9H3S4 243 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 SPHK2Q9NRA0 654 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 TMEM184CQ9NVA4 438 aa13.17□□□□□ -0.3
PRPF40B-209ENST00000548825 TRBV5-4A0A0C4DH59 114 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 RGS10O43665 173 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 PCDH8O95206 1070 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 CYP2A6P11509 494 aaPredicted RBP13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 IDUAP35475 653 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 ILF2Q12905 390 aaKnown RBP13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 EPS8Q12929 822 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 CAMK2GQ13555 558 aaPredicted RBP13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 MED22Q15528 200 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 HTR3DQ70Z44 454 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 IGFN1Q86VF2 1251 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 STX19Q8N4C7 294 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 GOLM1Q8NBJ4 401 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 JPH3Q8WXH2 748 aaPredicted RBP13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 PPCDCQ96CD2 204 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 ZHX1-C8orf76Q96EF9 292 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 ALOXE3Q9BYJ1 711 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 C11orf16Q9NQ32 467 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 TM7SF3Q9NS93 570 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 GPR83Q9NYM4 423 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 TRPC4Q9UBN4 977 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 RPS6KA6Q9UK32 745 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 ERVW-1Q9UQF0 538 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 MRPS23Q9Y3D9 190 aaKnown RBP13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 FAM220BPB1ANY3 271 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 H3BN98 237 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 KRT20P35900 424 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 DAB2P98082 770 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 ZNF829Q3KNS6 432 aaPredicted RBP13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 ZNF385BQ569K4 471 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 RBM48Q5RL73 367 aaKnown RBP13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 ZNF554Q86TJ5 538 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 SLC5A8Q8N695 610 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 COPS4Q9BT78 406 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 DUSP12Q9UNI6 340 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 RUVBL1Q9Y265 456 aaKnown RBP13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 TRBV23OR9-2A0A075B6M9 112 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 CYP7B1O75881 506 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 DNTTP04053 509 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 TIMP2P16035 220 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 PSMB5P28074 263 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 IMPA1P29218 277 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 VEGFBP49765 207 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 WDR5P61964 334 aaKnown RBP13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 SLC13A2Q13183 592 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 LEXMQ3ZCV2 418 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 ERAP2Q6P179 960 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 CNKSR3Q6P9H4 555 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 DEF8Q6ZN54 512 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 NPAS3Q8IXF0 933 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 FAM217AQ8IXS0 508 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 ZZZ3Q8IYH5 903 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 GLYATL1Q969I3 302 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 OTULINQ96BN8 352 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 ABCG4Q9H172 646 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 ZBTB20Q9HC78 741 aaPredicted RBP13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 DYRK4Q9NR20 520 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 SLC6A14Q9UN76 642 aa13.16□□□□□ -0.3
PRPF40B-209ENST00000548825 TBC1D3BA6NDS4 549 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms