RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 SLC25A25Q6KCM7 469 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 H3F3CQ6NXT2 135 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 DRICH1Q6PGQ1 229 aaPredicted RBP11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 VN1R4Q7Z5H5 301 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 CYP4X1Q8N118 509 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 KIF2BQ8N4N8 673 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 GIMAP7Q8NHV1 300 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 CHTF18Q8WVB6 975 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 TSLPQ969D9 159 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 SDCCAG3Q96C92 435 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 EBNA1BP2Q99848 306 aaKnown RBP11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 KIFC1Q9BW19 673 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 ATG10Q9H0Y0 220 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 ANKHQ9HCJ1 492 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 TMEM184CQ9NVA4 438 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 LRFN1Q9P244 771 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 SOX13Q9UN79 622 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 SH2B3Q9UQQ2 575 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 FBN2P35556 2912 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 PHF3Q92576 2039 aaKnown RBP11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 NDC80O14777 642 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 CEP104O60308 925 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 NSA2O95478 260 aaKnown RBP11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 MLYCDO95822 493 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 B3GALT4O96024 378 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 IMPA1P29218 277 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 ATP5DP30049 168 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 COILP38432 576 aaPredicted RBP11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 RFC3P40938 356 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 AGTR2P50052 363 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 OR4D2P58180 307 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 OLR1P78380 273 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 THOC5Q13769 683 aaKnown RBP11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 PTK6Q13882 451 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 ABRAXAS2Q15018 415 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 RNF187Q5TA31 235 aaPredicted RBP11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 NEPROQ6NW34 567 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 CYHR1Q6ZMK1 362 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 MEX3BQ6ZN04 569 aaKnown RBP11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 MBOAT1Q6ZNC8 495 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 Q6ZPB1 254 aaPredicted RBP11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 ZNF662Q6ZS27 426 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 CEP128Q6ZU80 1094 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 UBE2R2Q712K3 238 aaPredicted RBP11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 PIWIL4Q7Z3Z4 852 aaKnown RBP11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 SLC26A11Q86WA9 606 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 PDSS2Q86YH6 399 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 DOLPP1Q86YN1 238 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 CILP2Q8IUL8 1156 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 DENND6AQ8IWF6 608 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 LRRC8AQ8IWT6 810 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 LRRC56Q8IYG6 542 aaPredicted RBP11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 CPNE9Q8IYJ1 553 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 CPSF7Q8N684 471 aaKnown RBP11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 TMEM178AQ8NBL3 297 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 FAM98AQ8NCA5 519 aaKnown RBP11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 OR5T3Q8NGG3 340 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 M1APQ8TC57 530 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 THAP3Q8WTV1 239 aaPredicted RBP11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 MAIP1Q8WWC4 291 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 ASB11Q8WXH4 323 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 SCMH1Q96GD3 660 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 FRMD6Q96NE9 622 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 TCF12Q99081 682 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 CCDC68Q9H2F9 335 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 EIF2B3Q9NR50 452 aaKnown RBP11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 NAALAD2Q9Y3Q0 740 aa11.25□□□□□ -0.61
TRAFD1-205ENST00000548277 A8MUA0 341 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 B4GALT2O60909 372 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 SERPIND1P05546 499 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 MPC1LP0DKB6 136 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 OGNP20774 298 aaKnown RBP11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 AGAP20933 346 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 CXCR5P32302 372 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 RPS15AP62244 130 aaKnown RBP11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 CSNK1G2P78368 415 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 MEF2AQ02078 507 aaPredicted RBP11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 DHX34Q14147 1143 aaKnown RBP11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 EXT1Q16394 746 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 TTLL9Q3SXZ7 439 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 RNFT1Q5M7Z0 435 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 ZNF470Q6ECI4 717 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 TMEM214Q6NUQ4 689 aaKnown RBP11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 ZNF549Q6P9A3 640 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 C4orf22Q6V702 233 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 ASPGQ86U10 573 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 CDH24Q86UP0 819 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 GHDCQ8N2G8 530 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 SLC5A8Q8N695 610 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 CAMKVQ8NCB2 501 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 TRIM58Q8NG06 486 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 CA5BP1Q8WTZ4 195 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 SLC13A3Q8WWT9 602 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 ZNF669Q96BR6 464 aaPredicted RBP11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 LPAR4Q99677 370 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 GPR21Q99679 349 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 MMP25Q9NPA2 562 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 CCDC177Q9NQR7 707 aaPredicted RBP11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 PPT2Q9UMR5 302 aa11.24□□□□□ -0.61
TRAFD1-205ENST00000548277 ZKSCAN5Q9Y2L8 839 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms