RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 SRSF11Q05519 484 aaKnown RBP6.35□□□□□ -1.39
SCAF11-211ENST00000547950 MFAP5Q13361 173 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 FAM53BQ14153 422 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 PHKG1Q16816 387 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 MINDY4Q4G0A6 757 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 HECTD2Q5U5R9 776 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 B3GNTL1Q67FW5 361 aaPredicted RBP6.35□□□□□ -1.39
SCAF11-211ENST00000547950 CAPN13Q6MZZ7 669 aaPredicted RBP6.35□□□□□ -1.39
SCAF11-211ENST00000547950 LYPD4Q6UWN0 246 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 PRSS41Q7RTY9 318 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 VN1R4Q7Z5H5 301 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 SLC26A11Q86WA9 606 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 C17orf64Q86WR6 236 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 ANKMY2Q8IV38 441 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 ZC3H7AQ8IWR0 971 aaKnown RBP6.35□□□□□ -1.39
SCAF11-211ENST00000547950 SHISA5Q8N114 240 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 PDIK1LQ8N165 341 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 ARHGEF39Q8N4T4 335 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 KCT2Q8NC54 265 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 OR51Q1Q8NH59 317 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 FAR1Q8WVX9 515 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 SLC13A3Q8WWT9 602 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 METTL21AQ8WXB1 218 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 PSMF1Q92530 271 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 PYCR2Q96C36 320 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 LINGO1Q96FE5 620 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 SNF8Q96H20 258 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 C5orf34Q96MH7 638 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 CYTH2Q99418 400 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 BARD1Q99728 777 aaKnown RBP6.35□□□□□ -1.39
SCAF11-211ENST00000547950 NAT9Q9BTE0 207 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 TGIF2Q9GZN2 237 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.35□□□□□ -1.39
SCAF11-211ENST00000547950 PCBD2Q9H0N5 130 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 GRPEL1Q9HAV7 217 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 C14orf105Q9NVL8 296 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 ARL15Q9NXU5 204 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 STMN3Q9NZ72 180 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 HCN3Q9P1Z3 774 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 OSGIN2Q9Y236 505 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 SLC5A6Q9Y289 635 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 VWA7Q9Y334 891 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 LRRK2Q5S007 2527 aa6.35□□□□□ -1.39
SCAF11-211ENST00000547950 UTP20O75691 2785 aaKnown RBP6.35□□□□□ -1.39
SCAF11-211ENST00000547950 RELNP78509 3460 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 BSNQ9UPA5 3926 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 USP27XA6NNY8 438 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 H0YIG0 161 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 OR1F1O43749 312 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 SEC24DO94855 1032 aaPredicted RBP6.34□□□□□ -1.39
SCAF11-211ENST00000547950 BMP10O95393 424 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 SERPIND1P05546 499 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 ITGAMP11215 1152 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 ICAM2P13598 275 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 TCP1P17987 556 aaKnown RBP6.34□□□□□ -1.39
SCAF11-211ENST00000547950 IL1RNP18510 177 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 IVDP26440 423 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 GRK3P35626 688 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 BCL6P41182 706 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 TSFMP43897 325 aaKnown RBP6.34□□□□□ -1.39
SCAF11-211ENST00000547950 XCR1P46094 333 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 EFNA3P52797 238 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 DR1Q01658 176 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 POU4F2Q12837 409 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 PCOLCEQ15113 449 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 TEDDM1Q5T9Z0 273 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 LRRC8EQ6NSJ5 796 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 TMEM214Q6NUQ4 689 aaKnown RBP6.34□□□□□ -1.39
SCAF11-211ENST00000547950 TRMT10BQ6PF06 316 aaKnown RBP6.34□□□□□ -1.39
SCAF11-211ENST00000547950 TMEM205Q6UW68 189 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 FAM180AQ6UWF9 173 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 KIAA0408Q6ZU52 694 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 ASPGQ86U10 573 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 MFSD9Q8NBP5 474 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 CAMKVQ8NCB2 501 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 ST6GALNAC3Q8NDV1 305 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 ZCCHC10Q8TBK6 192 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 HAS2Q92819 552 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 MOCOSQ96EN8 888 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 CERS2Q96G23 380 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 TRIM54Q9BYV2 358 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 TRIM31Q9BZY9 425 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 VN1R1Q9GZP7 353 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 ZNF700Q9H0M5 742 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 KCNF1Q9H3M0 494 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 ANKHQ9HCJ1 492 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 RIC8BQ9NVN3 520 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 CHMP2BQ9UQN3 213 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 NAALAD2Q9Y3Q0 740 aa6.34□□□□□ -1.39
SCAF11-211ENST00000547950 SPTBP11277 2137 aa6.34□□□□□ -1.4
SCAF11-211ENST00000547950 LOC102723996A0A087X1L8 192 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 TRAV17A0A0B4J275 112 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 WIPF3A6NGB9 483 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 ZNF860A6NHJ4 632 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 PCDH17O14917 1159 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 TTI1O43156 1089 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 NDUFS4O43181 175 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 LRRTM2O43300 516 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 DNAJB6O75190 326 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 RDH16O75452 317 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms