RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 JPT2Q9H910 190 aa3.11□□□□□ -1.91
CCDC38-204ENST00000546816 TXNDC16Q9P2K2 825 aa3.11□□□□□ -1.91
CCDC38-204ENST00000546816 NEDD4P46934 1319 aa3.11□□□□□ -1.91
CCDC38-204ENST00000546816 SYNDIG1LA6NDD5 238 aa3.1□□□□□ -1.91
CCDC38-204ENST00000546816 ARHGEF33A8MVX0 844 aa3.1□□□□□ -1.91
CCDC38-204ENST00000546816 K7ENM7 598 aa3.1□□□□□ -1.91
CCDC38-204ENST00000546816 RNF103O00237 685 aa3.1□□□□□ -1.91
CCDC38-204ENST00000546816 CLDN4O14493 209 aa3.1□□□□□ -1.91
CCDC38-204ENST00000546816 GFPT2O94808 682 aa3.1□□□□□ -1.91
CCDC38-204ENST00000546816 SLCO2B1O94956 709 aa3.1□□□□□ -1.91
CCDC38-204ENST00000546816 F3P13726 295 aa3.1□□□□□ -1.91
CCDC38-204ENST00000546816 CD59P13987 128 aa3.1□□□□□ -1.91
CCDC38-204ENST00000546816 AZGP1P25311 298 aaKnown RBP3.1□□□□□ -1.91
CCDC38-204ENST00000546816 CETN2P41208 172 aa3.1□□□□□ -1.91
CCDC38-204ENST00000546816 UBASH3AP57075 661 aa3.1□□□□□ -1.91
CCDC38-204ENST00000546816 SNTB1Q13884 538 aaKnown RBP3.1□□□□□ -1.91
CCDC38-204ENST00000546816 TMEM266Q2M3C6 531 aa3.1□□□□□ -1.91
CCDC38-204ENST00000546816 LETM2Q2VYF4 491 aa3.1□□□□□ -1.91
CCDC38-204ENST00000546816 BMP2KLQ5H9B9 411 aa3.1□□□□□ -1.91
CCDC38-204ENST00000546816 ATP1A1-AS1Q5TC04 95 aa3.1□□□□□ -1.91
CCDC38-204ENST00000546816 RAPH1Q70E73 1250 aa3.1□□□□□ -1.91
CCDC38-204ENST00000546816 DET1Q7L5Y6 550 aa3.1□□□□□ -1.91
CCDC38-204ENST00000546816 ADCK1Q86TW2 530 aa3.1□□□□□ -1.91
CCDC38-204ENST00000546816 AVL9Q8NBF6 648 aa3.1□□□□□ -1.91
CCDC38-204ENST00000546816 SLC4A11Q8NBS3 891 aa3.1□□□□□ -1.91
CCDC38-204ENST00000546816 LRRC3BQ96PB8 259 aa3.1□□□□□ -1.91
CCDC38-204ENST00000546816 TBC1D7Q9P0N9 293 aa3.1□□□□□ -1.91
CCDC38-204ENST00000546816 CHORDC1Q9UHD1 332 aaPredicted RBP3.1□□□□□ -1.91
CCDC38-204ENST00000546816 TRPV2Q9Y5S1 764 aa3.1□□□□□ -1.91
CCDC38-204ENST00000546816 A0A087WZ39 114 aa3.09□□□□□ -1.91
CCDC38-204ENST00000546816 RTCAO00442 366 aaKnown RBP3.09□□□□□ -1.91
CCDC38-204ENST00000546816 OGTO15294 1046 aa3.09□□□□□ -1.91
CCDC38-204ENST00000546816 AHCYL1O43865 530 aa3.09□□□□□ -1.91
CCDC38-204ENST00000546816 CELF2O95319 508 aaKnown RBP3.09□□□□□ -1.91
CCDC38-204ENST00000546816 SERPING1P05155 500 aa3.09□□□□□ -1.91
CCDC38-204ENST00000546816 DUTP33316 252 aaKnown RBP3.09□□□□□ -1.91
CCDC38-204ENST00000546816 NNMTP40261 264 aa3.09□□□□□ -1.91
CCDC38-204ENST00000546816 ALCAMQ13740 583 aa3.09□□□□□ -1.91
CCDC38-204ENST00000546816 KIAA0141Q14154 515 aaPredicted RBP3.09□□□□□ -1.91
CCDC38-204ENST00000546816 UPP1Q16831 310 aa3.09□□□□□ -1.91
CCDC38-204ENST00000546816 FAM106AQ4KMX7 169 aa3.09□□□□□ -1.91
CCDC38-204ENST00000546816 FAM166AQ6J272 317 aa3.09□□□□□ -1.91
CCDC38-204ENST00000546816 BAIAP2L2Q6UXY1 529 aa3.09□□□□□ -1.91
CCDC38-204ENST00000546816 ANKRD33Q7Z3H0 272 aa3.09□□□□□ -1.91
CCDC38-204ENST00000546816 PRPF39Q86UA1 669 aaKnown RBP3.09□□□□□ -1.91
CCDC38-204ENST00000546816 TTC30BQ8N4P2 665 aa3.09□□□□□ -1.91
CCDC38-204ENST00000546816 C4orf32Q8N8J7 132 aa3.09□□□□□ -1.91
CCDC38-204ENST00000546816 C11orf52Q96A22 123 aa3.09□□□□□ -1.91
CCDC38-204ENST00000546816 NEDD4LQ96PU5 975 aa3.09□□□□□ -1.91
CCDC38-204ENST00000546816 APOL6Q9BWW8 343 aa3.09□□□□□ -1.91
CCDC38-204ENST00000546816 SLITRK2Q9H156 845 aa3.09□□□□□ -1.91
CCDC38-204ENST00000546816 IL1RAPQ9NPH3 570 aa3.09□□□□□ -1.91
CCDC38-204ENST00000546816 TNFRSF19Q9NS68 423 aa3.09□□□□□ -1.91
CCDC38-204ENST00000546816 IL36AQ9UHA7 158 aa3.09□□□□□ -1.91
CCDC38-204ENST00000546816 RPS6KA6Q9UK32 745 aa3.09□□□□□ -1.91
CCDC38-204ENST00000546816 PILRBQ9UKJ0 227 aa3.09□□□□□ -1.91
CCDC38-204ENST00000546816 MRPS18CQ9Y3D5 142 aaKnown RBP3.09□□□□□ -1.91
CCDC38-204ENST00000546816 KIF25-AS1Q9Y6Z4 181 aa3.09□□□□□ -1.91
CCDC38-204ENST00000546816 IL16Q14005 1332 aa3.09□□□□□ -1.91
CCDC38-204ENST00000546816 F8VVB4 439 aa3.08□□□□□ -1.92
CCDC38-204ENST00000546816 F8VWA3 439 aa3.08□□□□□ -1.92
CCDC38-204ENST00000546816 PSMD10O75832 226 aa3.08□□□□□ -1.92
CCDC38-204ENST00000546816 OR52Z1P0C646 297 aa3.08□□□□□ -1.92
CCDC38-204ENST00000546816 RBPJQ06330 500 aa3.08□□□□□ -1.92
CCDC38-204ENST00000546816 ACSM1Q08AH1 577 aa3.08□□□□□ -1.92
CCDC38-204ENST00000546816 ILF2Q12905 390 aaKnown RBP3.08□□□□□ -1.92
CCDC38-204ENST00000546816 LACTB2Q53H82 288 aaPredicted RBP3.08□□□□□ -1.92
CCDC38-204ENST00000546816 PRR30Q53SZ7 412 aaPredicted RBP3.08□□□□□ -1.92
CCDC38-204ENST00000546816 SUSD4Q5VX71 490 aa3.08□□□□□ -1.92
CCDC38-204ENST00000546816 CCDC60Q8IWA6 550 aaPredicted RBP3.08□□□□□ -1.92
CCDC38-204ENST00000546816 RPLP0P6Q8NHW5 317 aa3.08□□□□□ -1.92
CCDC38-204ENST00000546816 SECISBP2LQ93073 1101 aaKnown RBP3.08□□□□□ -1.92
CCDC38-204ENST00000546816 CNOT6LQ96LI5 555 aaKnown RBP3.08□□□□□ -1.92
CCDC38-204ENST00000546816 OCR1Q9BZK8 76 aa3.08□□□□□ -1.92
CCDC38-204ENST00000546816 ZNF581Q9P0T4 197 aa3.08□□□□□ -1.92
CCDC38-204ENST00000546816 B4GALT7Q9UBV7 327 aa3.08□□□□□ -1.92
CCDC38-204ENST00000546816 FBXL4Q9UKA2 621 aa3.08□□□□□ -1.92
CCDC38-204ENST00000546816 FAM169AQ9Y6X4 670 aa3.08□□□□□ -1.92
CCDC38-204ENST00000546816 NPHP3Q7Z494 1330 aa3.08□□□□□ -1.92
CCDC38-204ENST00000546816 A0A1W2PQ72 361 aa3.07□□□□□ -1.92
CCDC38-204ENST00000546816 C17orf105B2RV13 164 aa3.07□□□□□ -1.92
CCDC38-204ENST00000546816 MAGEB2O15479 319 aa3.07□□□□□ -1.92
CCDC38-204ENST00000546816 TADA2AO75478 443 aa3.07□□□□□ -1.92
CCDC38-204ENST00000546816 RENP00797 406 aa3.07□□□□□ -1.92
CCDC38-204ENST00000546816 LMO2P25791 158 aa3.07□□□□□ -1.92
CCDC38-204ENST00000546816 ABCE1P61221 599 aaKnown RBP3.07□□□□□ -1.92
CCDC38-204ENST00000546816 IFI35P80217 286 aaPredicted RBP3.07□□□□□ -1.92
CCDC38-204ENST00000546816 POU5F1Q01860 360 aaKnown RBP3.07□□□□□ -1.92
CCDC38-204ENST00000546816 SIX1Q15475 284 aaPredicted RBP3.07□□□□□ -1.92
CCDC38-204ENST00000546816 PTGISQ16647 500 aa3.07□□□□□ -1.92
CCDC38-204ENST00000546816 C9orf66Q5T8R8 295 aa3.07□□□□□ -1.92
CCDC38-204ENST00000546816 WDR78Q5VTH9 848 aa3.07□□□□□ -1.92
CCDC38-204ENST00000546816 AGAP7PQ5VUJ5 663 aa3.07□□□□□ -1.92
CCDC38-204ENST00000546816 RNLSQ5VYX0 342 aa3.07□□□□□ -1.92
CCDC38-204ENST00000546816 CFAP161Q6P656 301 aa3.07□□□□□ -1.92
CCDC38-204ENST00000546816 Q6ZVH6 145 aa3.07□□□□□ -1.92
CCDC38-204ENST00000546816 IQCHQ86VS3 1027 aa3.07□□□□□ -1.92
CCDC38-204ENST00000546816 CATSPER3Q86XQ3 398 aa3.07□□□□□ -1.92
CCDC38-204ENST00000546816 ZBED8Q8IZ13 594 aa3.07□□□□□ -1.92
CCDC38-204ENST00000546816 POMGNT2Q8NAT1 580 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms