RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 RAB8AP61006 207 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 SMAD3P84022 425 aaKnown RBP14.17□□□□□ -0.14
HOXC11-202ENST00000546378 FOXM1Q08050 763 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 TMIGD1Q6UXZ0 262 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 GALNT12Q8IXK2 581 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 ENTHD1Q8IYW4 607 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 MMP21Q8N119 569 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 SVOPQ8N4V2 548 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 WFDC5Q8TCV5 224 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 DYNC2LI1Q8TCX1 351 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 GPR151Q8TDV0 419 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 BRINP2Q9C0B6 783 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 SLIRPQ9GZT3 109 aaKnown RBP14.17□□□□□ -0.14
HOXC11-202ENST00000546378 RANGRFQ9HD47 186 aaPredicted RBP14.17□□□□□ -0.14
HOXC11-202ENST00000546378 ANKMY1Q9P2S6 941 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 CLEC2DQ9UHP7 191 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 ZW10O43264 779 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 SCELO95171 688 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 ANXA5P08758 320 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 OGNP20774 298 aaKnown RBP14.16□□□□□ -0.14
HOXC11-202ENST00000546378 HOXD11P31277 338 aaPredicted RBP14.16□□□□□ -0.14
HOXC11-202ENST00000546378 KDELR2P33947 212 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 IL18R1Q13478 541 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 INO80DQ53TQ3 878 aaPredicted RBP14.16□□□□□ -0.14
HOXC11-202ENST00000546378 DDI2Q5TDH0 399 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 SDE2Q6IQ49 451 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 LGI4Q8N135 537 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 ZBTB2Q8N680 514 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 C1orf52Q8N6N3 182 aaKnown RBP14.16□□□□□ -0.14
HOXC11-202ENST00000546378 DUS3LQ96G46 650 aaKnown RBP14.16□□□□□ -0.14
HOXC11-202ENST00000546378 YIPF4Q9BSR8 244 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 IRF2BPLQ9H1B7 796 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 TPT1P8Q9HAU6 139 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 RPRD1BQ9NQG5 326 aaKnown RBP14.16□□□□□ -0.14
HOXC11-202ENST00000546378 YARS2Q9Y2Z4 477 aaKnown RBP14.16□□□□□ -0.14
HOXC11-202ENST00000546378 PCDH17O14917 1159 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 CH25HO95992 272 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 IL6P05231 212 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 CLEC2LP0C7M8 214 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 ZNF135P52742 658 aaPredicted RBP14.16□□□□□ -0.14
HOXC11-202ENST00000546378 SLC35A2P78381 396 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 TUBA3CQ13748 450 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 PYDC2Q56P42 97 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 ZC3H12BQ5HYM0 836 aaKnown RBP14.16□□□□□ -0.14
HOXC11-202ENST00000546378 RPS26P11Q5JNZ5 115 aaPredicted RBP14.16□□□□□ -0.14
HOXC11-202ENST00000546378 RTP2Q5QGT7 225 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 FUT10Q6P4F1 479 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 LYPD8Q6UX82 237 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 EIF3MQ7L2H7 374 aaKnown RBP14.16□□□□□ -0.14
HOXC11-202ENST00000546378 TIGD4Q8IY51 512 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 OR10G2Q8NGC3 310 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 PHF21AQ96BD5 680 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 SLC22A12Q96S37 553 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 YME1L1Q96TA2 773 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 ILVBLA1L0T0 632 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 GABARAPO95166 117 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 CSKP41240 450 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 CASP3P42574 277 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 SLC15A1P46059 708 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 EXOC3L2Q2M3D2 409 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 PARP15Q460N3 678 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 CCSMST1Q4G0I0 132 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 COX20Q5RI15 118 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 TXNDC8Q6A555 127 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 ERAP2Q6P179 960 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 LAX1Q8IWV1 398 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 APCDD1Q8J025 514 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 SLC43A3Q8NBI5 491 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 OR4A15Q8NGL6 344 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 NFKBIDQ8NI38 313 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 NUSAP1Q9BXS6 441 aaKnown RBP14.16□□□□□ -0.14
HOXC11-202ENST00000546378 TTTY10Q9BZA0 68 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 CARD8Q9Y2G2 431 aa14.16□□□□□ -0.14
HOXC11-202ENST00000546378 CFAP20Q9Y6A4 193 aaKnown RBP14.16□□□□□ -0.14
HOXC11-202ENST00000546378 OR6C70A6NIJ9 312 aa14.15□□□□□ -0.14
HOXC11-202ENST00000546378 HYAL3O43820 417 aaPredicted RBP14.15□□□□□ -0.14
HOXC11-202ENST00000546378 ACSL4O60488 711 aa14.15□□□□□ -0.14
HOXC11-202ENST00000546378 CKMP06732 381 aa14.15□□□□□ -0.14
HOXC11-202ENST00000546378 FCER2P06734 321 aa14.15□□□□□ -0.14
HOXC11-202ENST00000546378 ITIH1P19827 911 aa14.15□□□□□ -0.14
HOXC11-202ENST00000546378 CSNK1DP48730 415 aa14.15□□□□□ -0.14
HOXC11-202ENST00000546378 MTFR2Q6P444 385 aa14.15□□□□□ -0.14
HOXC11-202ENST00000546378 SVOPLQ8N434 492 aa14.15□□□□□ -0.14
HOXC11-202ENST00000546378 ADAMTS16Q8TE57 1224 aa14.15□□□□□ -0.14
HOXC11-202ENST00000546378 PIH1D2Q8WWB5 315 aa14.15□□□□□ -0.14
HOXC11-202ENST00000546378 CIDECQ96AQ7 238 aaPredicted RBP14.15□□□□□ -0.14
HOXC11-202ENST00000546378 OR51B5Q9H339 312 aa14.15□□□□□ -0.14
HOXC11-202ENST00000546378 THG1LQ9NWX6 298 aaKnown RBP14.15□□□□□ -0.14
HOXC11-202ENST00000546378 PCDHGB6Q9Y5F9 930 aa14.15□□□□□ -0.14
HOXC11-202ENST00000546378 N6AMT1Q9Y5N5 214 aa14.15□□□□□ -0.14
HOXC11-202ENST00000546378 GLYATL1P3A0A0U1RQE8 302 aa14.15□□□□□ -0.14
HOXC11-202ENST00000546378 EIF2DP41214 584 aaKnown RBP14.15□□□□□ -0.14
HOXC11-202ENST00000546378 BCL2L1Q07817 233 aa14.15□□□□□ -0.14
HOXC11-202ENST00000546378 ABHD18Q0P651 414 aa14.15□□□□□ -0.14
HOXC11-202ENST00000546378 ATP13A5Q4VNC0 1218 aa14.15□□□□□ -0.14
HOXC11-202ENST00000546378 TMPRSS11BQ86T26 416 aa14.15□□□□□ -0.14
HOXC11-202ENST00000546378 NLRP8Q86W28 1048 aa14.15□□□□□ -0.14
HOXC11-202ENST00000546378 ARL14EPQ8N8R7 260 aaPredicted RBP14.15□□□□□ -0.14
HOXC11-202ENST00000546378 NLGN4YQ8NFZ3 816 aaPredicted RBP14.15□□□□□ -0.14
HOXC11-202ENST00000546378 CLIP3Q96DZ5 547 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms