RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 NR2C2P49116 596 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 KPNA2P52292 529 aaKnown RBP4.46□□□□□ -1.7
CNGA1-209ENST00000544810 DGKEP52429 567 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 ISL1P61371 349 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 POU6F2P78424 691 aaPredicted RBP4.46□□□□□ -1.7
CNGA1-209ENST00000544810 PRR20EP86478 221 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 PRR20CP86479 221 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 PRR20DP86480 221 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 PRR20BP86481 221 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 PRR20AP86496 221 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 ID3Q02535 119 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 GRIK2Q13002 908 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 TUSC3Q13454 348 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 MTM1Q13496 603 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 DMC1Q14565 340 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 CLCA4Q14CN2 919 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 CARTPTQ16568 116 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 USP39Q53GS9 565 aaKnown RBP4.46□□□□□ -1.7
CNGA1-209ENST00000544810 AGKQ53H12 422 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 CLVS2Q5SYC1 327 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 SLC35F1Q5T1Q4 408 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 PXDC1Q5TGL8 231 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 ZNF691Q5VV52 312 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 TMEM236Q5W0B7 351 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 TMEM270Q6UE05 265 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 SYT13Q7L8C5 426 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 CCDC190Q86UF4 302 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 GATAD2AQ86YP4 633 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 SPPL2CQ8IUH8 684 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 SYT12Q8IV01 421 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 MPP5Q8N3R9 675 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 AADATQ8N5Z0 425 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 PLD5Q8N7P1 536 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 SETD9Q8NE22 299 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 KBTBD8Q8NFY9 601 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 MCOLN3Q8TDD5 553 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 UBASH3BQ8TF42 649 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 DNAJA4Q8WW22 397 aaPredicted RBP4.46□□□□□ -1.7
CNGA1-209ENST00000544810 CCDC126Q96EE4 140 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 CERS2Q96G23 380 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 TSNARE1Q96NA8 513 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 CAMK1GQ96NX5 476 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 LRRC3BQ96PB8 259 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 DCSTAMPQ9H295 470 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 PPA2Q9H2U2 334 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 OR51B5Q9H339 312 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 NXF3Q9H4D5 531 aaKnown RBP4.46□□□□□ -1.7
CNGA1-209ENST00000544810 SOX17Q9H6I2 414 aaPredicted RBP4.46□□□□□ -1.7
CNGA1-209ENST00000544810 CASS4Q9NQ75 786 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 FSCN3Q9NQT6 498 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 ZNF175Q9Y473 711 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 INSL5Q9Y5Q6 135 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 LYVE1Q9Y5Y7 322 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 MYO18BQ8IUG5 2567 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 PTPRJQ12913 1337 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 EVPLQ92817 2033 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 DOCK6Q96HP0 2047 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 ZFC3H1O60293 1989 aaKnown RBP4.46□□□□□ -1.7
CNGA1-209ENST00000544810 A0A075B6Q4 140 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 FAM149AA5PLN7 773 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 CASTOR2A6NHX0 329 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 GOLGA8JA6NMD2 632 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 EFCAB9A8MZ26 197 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 HACD1B0YJ81 288 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 F5H423 210 aaPredicted RBP4.45□□□□□ -1.7
CNGA1-209ENST00000544810 H0YCG3 227 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 APOL1O14791 398 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 SEC14L5O43304 696 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 PRPSAP2O60256 369 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 RNGTTO60942 597 aaKnown RBP4.45□□□□□ -1.7
CNGA1-209ENST00000544810 MAFO75444 373 aaPredicted RBP4.45□□□□□ -1.7
CNGA1-209ENST00000544810 VNN1O95497 513 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 EGFP01133 1207 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 C2P06681 752 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 PSKH1P11801 424 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 ITPKBP27987 946 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 OXTRP30559 389 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 SLC15A1P46059 708 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 SEPHS1P49903 392 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 CDH13P55290 713 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 VBP1P61758 197 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 CSNK2BP67870 215 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 SLC35A2P78381 396 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 CD47Q08722 323 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 COX10Q12887 443 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 CYP51A1Q16850 503 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 TMEM95Q3KNT9 176 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 ITPRIPL2Q3MIP1 535 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 XKR3Q5GH77 459 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 SLC6A19Q695T7 634 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 LAIR2Q6ISS4 152 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 DBX2Q6ZNG2 339 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 DPY19L3Q6ZPD9 716 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 TMPRSS7Q7RTY8 843 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 MAMDC2Q7Z304 686 aaPredicted RBP4.45□□□□□ -1.7
CNGA1-209ENST00000544810 CDH24Q86UP0 819 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 PIGZQ86VD9 579 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 KIF18BQ86Y91 864 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 GPALPP1Q8IXQ4 340 aa4.45□□□□□ -1.7
CNGA1-209ENST00000544810 PLD6Q8N2A8 252 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms