RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 ZRSR2Q15696 482 aaKnown RBP12.5□□□□□ -0.41
DDX11-227ENST00000544652 GPR19Q15760 415 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 CPSF6Q16630 551 aaKnown RBP eCLIP12.5□□□□□ -0.41
DDX11-227ENST00000544652 DEFB110Q30KQ9 67 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 TCTE1Q5JU00 501 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 MANEAQ5SRI9 462 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 C10orf62Q5T681 223 aaPredicted RBP12.5□□□□□ -0.41
DDX11-227ENST00000544652 RNF165Q6ZSG1 346 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 VN1R5Q7Z5H4 357 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.5□□□□□ -0.41
DDX11-227ENST00000544652 OR4N4Q8N0Y3 316 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 OR8K5Q8NH50 307 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 WDR36Q8NI36 951 aaKnown RBP12.5□□□□□ -0.41
DDX11-227ENST00000544652 FAM76AQ8TAV0 307 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 NT5CQ8TCD5 201 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 CREB3L4Q8TEY5 395 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 REPS1Q96D71 796 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 PRR11Q96HE9 360 aaPredicted RBP12.5□□□□□ -0.41
DDX11-227ENST00000544652 OR6C1Q96RD1 312 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 ZNF395Q9H8N7 513 aaPredicted RBP12.5□□□□□ -0.41
DDX11-227ENST00000544652 THAP1Q9NVV9 213 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 PSD3Q9NYI0 1048 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 ADGRE2Q9UHX3 823 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 PPT2Q9UMR5 302 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 PCDHGA8Q9Y5G5 932 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 CNOT1A5YKK6 2376 aaKnown RBP12.49□□□□□ -0.41
DDX11-227ENST00000544652 KNTC1P50748 2209 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 SERTM1A2A2V5 107 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 FAM149AA5PLN7 773 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 PLD2O14939 933 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 HYAL3O43820 417 aaPredicted RBP12.49□□□□□ -0.41
DDX11-227ENST00000544652 LYPLA1O75608 230 aaPredicted RBP12.49□□□□□ -0.41
DDX11-227ENST00000544652 TBX6O95947 436 aaPredicted RBP12.49□□□□□ -0.41
DDX11-227ENST00000544652 CTSBP07858 339 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 UROSP10746 265 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 CCL4P13236 92 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 ARL1P40616 181 aaPredicted RBP12.49□□□□□ -0.41
DDX11-227ENST00000544652 ETV5P41161 510 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 PIK3CBP42338 1070 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 EMP3P54852 163 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 FOXA1P55317 472 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 HYAL2Q12891 473 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 PWP1Q13610 501 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 RBBP5Q15291 538 aaKnown RBP12.49□□□□□ -0.41
DDX11-227ENST00000544652 PRTGQ2VWP7 1150 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 UGT3A2Q3SY77 523 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 KANK2Q63ZY3 851 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 ADNP2Q6IQ32 1131 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 IGF2-ASQ6U949 168 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 ASPGQ86U10 573 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 MYLK4Q86YV6 388 aaPredicted RBP12.49□□□□□ -0.41
DDX11-227ENST00000544652 ARHGEF39Q8N4T4 335 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 CDYL2Q8N8U2 506 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 TRPV3Q8NET8 790 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 OR1L3Q8NH93 324 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 ZNF473Q8WTR7 871 aaKnown RBP12.49□□□□□ -0.41
DDX11-227ENST00000544652 DYDC1Q8WWB3 177 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 USP7Q93009 1102 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 KCNA7Q96RP8 456 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 B3GNT4Q9C0J1 378 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 CCDC134Q9H6E4 229 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 FANCEQ9HB96 536 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 ZDHHC2Q9UIJ5 367 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 SERTAD3Q9UJW9 196 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 RARRES3Q9UL19 164 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 SNX6Q9UNH7 406 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 SATB2Q9UPW6 733 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 RAP2CQ9Y3L5 183 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 DCHS1Q96JQ0 3298 aa12.49□□□□□ -0.41
DDX11-227ENST00000544652 ANKDD1BA6NHY2 528 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 TMEM150CB9EJG8 249 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 FOXE1O00358 373 aaPredicted RBP12.48□□□□□ -0.41
DDX11-227ENST00000544652 TXNDC9O14530 226 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 AZIN1O14977 448 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 P2RX6O15547 441 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 HSPA4LO95757 839 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 SERPINA6P08185 405 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 ITIH1P19827 911 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 MDH1P40925 334 aaKnown RBP12.48□□□□□ -0.41
DDX11-227ENST00000544652 ITGA1P56199 1179 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 VSX2P58304 361 aaPredicted RBP12.48□□□□□ -0.41
DDX11-227ENST00000544652 RAB15P59190 212 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 ADPRMQ3LIE5 342 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.48□□□□□ -0.41
DDX11-227ENST00000544652 C3orf38Q5JPI3 329 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 WASHC2DQ5SRD0 308 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 FRG2Q64ET8 278 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 TLDC1Q6P9B6 456 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 PPP1R3BQ86XI6 285 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 KIRREL3Q8IZU9 778 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 CLYBLQ8N0X4 340 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 ZNF781Q8N8C0 355 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 CAMKVQ8NCB2 501 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 HUS1BQ8NHY5 278 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 METTL6Q8TCB7 284 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 LRRC8CQ8TDW0 803 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 SLC13A3Q8WWT9 602 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 RERGQ96A58 199 aaPredicted RBP12.48□□□□□ -0.41
DDX11-227ENST00000544652 FRG2BQ96QU4 278 aa12.48□□□□□ -0.41
DDX11-227ENST00000544652 TAAR9Q96RI9 348 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms