RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 ARSDP51689 593 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 RAB25P57735 213 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 ABHD18Q0P651 414 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 GRB7Q14451 532 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 TCEAL1Q15170 157 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 ZFP69Q49AA0 526 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 ADNP2Q6IQ32 1131 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 PGBD2Q6P3X8 592 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 HSDL2Q6YN16 418 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 APCDD1Q8J025 514 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 PROKR2Q8NFJ6 384 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 GLYATL1Q969I3 302 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 GPN1Q9HCN4 374 aaPredicted RBP12.4□□□□□ -0.42
CHD4-211ENST00000544484 CD320Q9NPF0 282 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 FAM120CQ9NX05 1096 aaKnown RBP12.4□□□□□ -0.42
CHD4-211ENST00000544484 PMF1-BGLAPU3KQ54 211 aa12.4□□□□□ -0.42
CHD4-211ENST00000544484 CDC123O75794 336 aaPredicted RBP12.4□□□□□ -0.43
CHD4-211ENST00000544484 SRPRAP08240 638 aaKnown RBP12.4□□□□□ -0.43
CHD4-211ENST00000544484 CHRM1P11229 460 aaPredicted RBP12.4□□□□□ -0.43
CHD4-211ENST00000544484 CD1DP15813 335 aa12.4□□□□□ -0.43
CHD4-211ENST00000544484 HOXC12P31275 282 aa12.4□□□□□ -0.43
CHD4-211ENST00000544484 CBX5P45973 191 aa12.4□□□□□ -0.43
CHD4-211ENST00000544484 LEPRP48357 1165 aaKnown RBP12.4□□□□□ -0.43
CHD4-211ENST00000544484 RHDQ02161 417 aa12.4□□□□□ -0.43
CHD4-211ENST00000544484 CD47Q08722 323 aa12.4□□□□□ -0.43
CHD4-211ENST00000544484 LINGO2Q7L985 606 aa12.4□□□□□ -0.43
CHD4-211ENST00000544484 SLC29A4Q7RTT9 530 aa12.4□□□□□ -0.43
CHD4-211ENST00000544484 TREML1Q86YW5 311 aa12.4□□□□□ -0.43
CHD4-211ENST00000544484 PNPLA1Q8N8W4 532 aa12.4□□□□□ -0.43
CHD4-211ENST00000544484 SEC14L1Q92503 715 aa12.4□□□□□ -0.43
CHD4-211ENST00000544484 IL17FQ96PD4 163 aa12.4□□□□□ -0.43
CHD4-211ENST00000544484 PIK3CBP42338 1070 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 KRTCAP2Q8N6L1 136 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 ZNF527Q8NB42 609 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 PDPRQ8NCN5 879 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 C7orf57Q8NEG2 295 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 PHOSPHO1Q8TCT1 267 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 HRASLS2Q9NWW9 162 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 CYP8B1Q9UNU6 501 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 GRXCR1A8MXD5 290 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 INMTO95050 263 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 RNF144AP50876 292 aaPredicted RBP12.39□□□□□ -0.43
CHD4-211ENST00000544484 C1orf61Q13536 156 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 SMURF2Q9HAU4 748 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 CHMP1AQ9HD42 196 aaPredicted RBP12.39□□□□□ -0.43
CHD4-211ENST00000544484 Q9N2J8 555 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 LRRC37A3O60309 1634 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 IGKV6D-21A0A0A0MT36 114 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 LOC100130705A0A1B0GUX0 176 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 A0A1W2PQ72 361 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 C9J4A7 227 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 SCDO00767 359 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 FANCGO15287 622 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 PRMT3O60678 531 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 S1PR4O95977 384 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 HMGN1P05114 100 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 LINGO3P0C6S8 592 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 AGXTP21549 392 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 VIPR2P41587 438 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 CDKN2DP55273 166 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 NIPAL4Q0D2K0 466 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 CNPY1Q3B7I2 92 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 NADK2Q4G0N4 442 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 ARL9Q6T311 187 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 SETD6Q8TBK2 473 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 KLHDC7BQ96G42 594 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 FBXL20Q96IG2 436 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 P2RY13Q9BPV8 354 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 TAS2R7Q9NYW3 318 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 POFUT2Q9Y2G5 429 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 HTRA3P83110 453 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 TECRLQ5HYJ1 363 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 PLEKHS1Q5SXH7 462 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 LDLRAD1Q5T700 205 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 HMGN2P46Q86SG4 172 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 CCDC116Q8IYX3 515 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 OR52E4Q8NGH9 312 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 HERPUD2Q9BSE4 406 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 PRRC2BQ5JSZ5 2229 aaKnown RBP12.39□□□□□ -0.43
CHD4-211ENST00000544484 SAGE2PA6NJ88 616 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 TLX2O43763 284 aaPredicted RBP12.39□□□□□ -0.43
CHD4-211ENST00000544484 SLC35E2BP0CK96 405 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 PRSS56P0CW18 603 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 DNAJB13P59910 316 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 ZNF763Q0D2J5 394 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 SP140Q13342 867 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 SYVN1Q86TM6 617 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 LRRTM3Q86VH5 581 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 KLHL36Q8N4N3 616 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 ALPK1Q96QP1 1244 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 MED28Q9H204 178 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 SEC61A2Q9H9S3 476 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 IL21RQ9HBE5 538 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 NEUROD4Q9HD90 331 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 ACTL7AQ9Y615 435 aa12.39□□□□□ -0.43
CHD4-211ENST00000544484 CLPXO76031 633 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 ZNF3P17036 446 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 CBLP22681 906 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 RPS6KA3P51812 740 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 OR5T3Q8NGG3 340 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms