RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 PPP1R8Q12972 351 aaKnown RBP13.11□□□□□ -0.31
HCFC2-202ENST00000544223 GK3PQ14409 553 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 HIST2H2ACQ16777 129 aaPredicted RBP13.11□□□□□ -0.31
HCFC2-202ENST00000544223 HIST2H2AA3Q6FI13 130 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 LCTLQ6UWM7 567 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 ZNF687Q8N1G0 1237 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 TMEM102Q8N9M5 508 aaPredicted RBP13.11□□□□□ -0.31
HCFC2-202ENST00000544223 OR10G6Q8NH81 332 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 SMPDL3AQ92484 453 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 SLC6A18Q96N87 628 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 SLC6A20Q9NP91 592 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 ASIC5Q9NY37 505 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 USP36Q9P275 1121 aaKnown RBP13.11□□□□□ -0.31
HCFC2-202ENST00000544223 FBXL21Q9UKT6 434 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 SCML1Q9UN30 329 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 RUVBL1Q9Y265 456 aaKnown RBP13.11□□□□□ -0.31
HCFC2-202ENST00000544223 SNX11Q9Y5W9 270 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 CABIN1Q9Y6J0 2220 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 PDLIM1O00151 329 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 BTN3A3O00478 584 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 HAT1O14929 419 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 SCN2BO60939 215 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 NUDT7P0C024 238 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 HTR1BP28222 390 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 TIA1P31483 386 aaKnown RBP eCLIP13.11□□□□□ -0.31
HCFC2-202ENST00000544223 FBXO43Q4G163 708 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 KIAA1614Q5VZ46 1190 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 GLYATQ6IB77 296 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 PRMT9Q6P2P2 845 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 ENPP6Q6UWR7 440 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 TRIM69Q86WT6 500 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 TSTD1Q8NFU3 115 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 OR5AK3PQ8NH89 298 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 FBXO30Q8TB52 745 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 POLMQ9NP87 494 aaPredicted RBP13.11□□□□□ -0.31
HCFC2-202ENST00000544223 ACSL6Q9UKU0 697 aa13.11□□□□□ -0.31
HCFC2-202ENST00000544223 DNMT3AQ9Y6K1 912 aaPredicted RBP13.11□□□□□ -0.31
HCFC2-202ENST00000544223 EME2A4GXA9 379 aaPredicted RBP13.1□□□□□ -0.31
HCFC2-202ENST00000544223 ANKDD1BA6NHY2 528 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 GLOD5A6NK44 160 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 SAC3D1A6NKF1 404 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 ISM1B1AKI9 464 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 DCNP07585 359 aaKnown RBP13.1□□□□□ -0.31
HCFC2-202ENST00000544223 IL3P08700 152 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 PPP1CAP62136 330 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 CSNK1G2P78368 415 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 E2F2Q14209 437 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 MPEG1Q2M385 716 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 PAGE2BQ5JRK9 111 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 TBCELQ5QJ74 424 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 TLDC1Q6P9B6 456 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 ZNF438Q7Z4V0 828 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 ADGRF3Q8IZF5 1079 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 GLB1L3Q8NCI6 653 aaPredicted RBP13.1□□□□□ -0.31
HCFC2-202ENST00000544223 SLC29A1Q99808 456 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 DPH7Q9BTV6 452 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 KLHL4Q9C0H6 718 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 FBRSQ9HAH7 460 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 BRF2Q9HAW0 419 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 AASDHPPTQ9NRN7 309 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 TMED5Q9Y3A6 229 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 DHRS12A0PJE2 317 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 TXNDC9O14530 226 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 SCAMP2O15127 329 aaKnown RBP13.1□□□□□ -0.31
HCFC2-202ENST00000544223 RPN2P04844 631 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 PRPS1L1P21108 318 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 AKT2P31751 481 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 GCKP35557 465 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 BCL6P41182 706 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 ALDH9A1P49189 494 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 CCR8P51685 355 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 C2orf80Q0P641 193 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 TRAP1Q12931 704 aaKnown RBP13.1□□□□□ -0.31
HCFC2-202ENST00000544223 GAB1Q13480 694 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 RUNDC3AQ59EK9 446 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 DEFB123Q8N688 67 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 OR2T12Q8NG77 320 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 LCN9Q8WX39 176 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 MAL2Q969L2 176 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 WDR34Q96EX3 536 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 SCARF2Q96GP6 870 aaPredicted RBP13.1□□□□□ -0.31
HCFC2-202ENST00000544223 C17orf62Q9BQA9 187 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 MIR1-1HGQ9H1L0 117 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 LHX9Q9NQ69 397 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 SLC2A4RGQ9NR83 387 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 ACTR3BQ9P1U1 418 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 SPASTQ9UBP0 616 aa13.1□□□□□ -0.31
HCFC2-202ENST00000544223 TRBV5-3A0A0A0MS03 114 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 UBTFL6P0CB48 400 aaPredicted RBP13.09□□□□□ -0.31
HCFC2-202ENST00000544223 THEGLP0DJG4 465 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 GLULP15104 373 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 ATP6V1C1P21283 382 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 TEAD1P28347 426 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 MAPK1P28482 360 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 TPP2P29144 1249 aaPredicted RBP13.09□□□□□ -0.31
HCFC2-202ENST00000544223 PKLRP30613 574 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 FOXM1Q08050 763 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 LRRC32Q14392 662 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 PLCL1Q15111 1095 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 NKG7Q16617 165 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms