RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 SLCO1B3Q9NPD5 702 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 MGAT4CQ9UBM8 478 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 CACNG4Q9UBN1 327 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 NAGPAQ9UK23 515 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 PPM1HQ9ULR3 514 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 PTGDR2Q9Y5Y4 395 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 MN1Q10571 1320 aaPredicted RBP8.63□□□□□ -1.03
VPS13D-212ENST00000543766 MYH14Q7Z406 1995 aaKnown RBP8.62□□□□□ -1.03
VPS13D-212ENST00000543766 BRCA1P38398 1863 aaKnown RBP8.62□□□□□ -1.03
VPS13D-212ENST00000543766 SCN7AQ01118 1682 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 EML1O00423 815 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 MAFKO60675 156 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 SCN2BO60939 215 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 SH3BGRLO75368 114 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 CYP7B1O75881 506 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 APBA3O96018 575 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 TGFAP01135 160 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 UGT2B4P06133 528 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 H2AFB2P0C5Z0 115 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 FCER1AP12319 257 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 POU3F2P20265 443 aaPredicted RBP8.62□□□□□ -1.03
VPS13D-212ENST00000543766 MSR1P21757 451 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 CEACAM3P40198 252 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 RGS8P57771 180 aaPredicted RBP8.62□□□□□ -1.03
VPS13D-212ENST00000543766 SNAPC2Q13487 334 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 SCARF1Q14162 830 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 FAM83EQ2M2I3 478 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 AASDHQ4L235 1098 aaPredicted RBP8.62□□□□□ -1.03
VPS13D-212ENST00000543766 FGD3Q5JSP0 725 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 NCMAPQ5T1S8 102 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 GCNT7Q6ZNI0 430 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 FAM83HQ6ZRV2 1179 aaPredicted RBP8.62□□□□□ -1.03
VPS13D-212ENST00000543766 SH2D5Q6ZV89 423 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 SLC26A9Q7LBE3 791 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 SLC9A9Q8IVB4 645 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 STK40Q8N2I9 435 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 OR2T34Q8NGX1 318 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 EDARADDQ8WWZ3 215 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 SLCO2A1Q92959 643 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 ISG20Q96AZ6 181 aaKnown RBP8.62□□□□□ -1.03
VPS13D-212ENST00000543766 NSL1Q96IY1 281 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 ZNF48Q96MX3 618 aaPredicted RBP8.62□□□□□ -1.03
VPS13D-212ENST00000543766 TREX2Q9BQ50 279 aaPredicted RBP8.62□□□□□ -1.03
VPS13D-212ENST00000543766 ZNF559Q9BR84 538 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 B3GNT5Q9BYG0 378 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 ZNF341Q9BYN7 854 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 TRIM31Q9BZY9 425 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 ZDHHC5Q9C0B5 715 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 CHRDQ9H2X0 955 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 REEP4Q9H6H4 257 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 ZNF334Q9HCZ1 680 aaPredicted RBP8.62□□□□□ -1.03
VPS13D-212ENST00000543766 FAM198AQ9UFP1 575 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 IL17BQ9UHF5 180 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 STUB1Q9UNE7 303 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 IRS2Q9Y4H2 1338 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 CACNG3O60359 315 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 MT-ATP6P00846 226 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 TSHRP16473 764 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 GCAP28676 217 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 RAB2AP61019 212 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 IL9RQ01113 521 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 CNTN2Q02246 1040 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 LRRC32Q14392 662 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 OR8G1Q15617 311 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 KIF19Q2TAC6 998 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 FAXCQ5TGI0 409 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 MAP1SQ66K74 1059 aaPredicted RBP8.62□□□□□ -1.03
VPS13D-212ENST00000543766 LPCAT3Q6P1A2 487 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 KYAT3Q6YP21 454 aaKnown RBP8.62□□□□□ -1.03
VPS13D-212ENST00000543766 TMEM200AQ86VY9 491 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 TDRPQ86YL5 185 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 PRELID2Q8N945 189 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 EXTL1Q92935 676 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 NINJ1Q92982 152 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 MASTLQ96GX5 879 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 TRABDQ9H4I3 376 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 AGO4Q9HCK5 861 aaKnown RBP8.62□□□□□ -1.03
VPS13D-212ENST00000543766 POT1Q9NUX5 634 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 CD84Q9UIB8 345 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 ZNF230Q9UIE0 474 aaPredicted RBP8.62□□□□□ -1.03
VPS13D-212ENST00000543766 DKKL1Q9UK85 242 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 ITGA11Q9UKX5 1188 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 A0A096LPI6 279 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 FAM234BA2RU67 622 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 M0R2N6 131 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 UBE2CO00762 179 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 S100A8P05109 93 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 SERPINF2P08697 491 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 INHBBP09529 407 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 TRIM49P0CI25 452 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 TRIM49CP0CI26 452 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 NT5EP21589 574 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 HOXA7P31268 230 aaPredicted RBP8.62□□□□□ -1.03
VPS13D-212ENST00000543766 GDF10P55107 478 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 ACTBP60709 375 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 ACTA2P62736 377 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 ACTG1P63261 375 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 ACTG2P63267 376 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 ACTC1P68032 377 aa8.62□□□□□ -1.03
VPS13D-212ENST00000543766 ACTA1P68133 377 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms