RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 CLEC6AQ6EIG7 209 aa22.08■■□□□ 1.13
HOMER3-205ENST00000542541 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.08■■□□□ 1.13
HOMER3-205ENST00000542541 GPR135Q8IZ08 494 aa22.08■■□□□ 1.13
HOMER3-205ENST00000542541 OR4N4Q8N0Y3 316 aa22.08■■□□□ 1.13
HOMER3-205ENST00000542541 ZNF781Q8N8C0 355 aa22.08■■□□□ 1.13
HOMER3-205ENST00000542541 HUS1BQ8NHY5 278 aa22.08■■□□□ 1.13
HOMER3-205ENST00000542541 SELENOMQ8WWX9 145 aa22.08■■□□□ 1.13
HOMER3-205ENST00000542541 FAR2Q96K12 515 aa22.08■■□□□ 1.13
HOMER3-205ENST00000542541 OR6C1Q96RD1 312 aa22.08■■□□□ 1.13
HOMER3-205ENST00000542541 TNFRSF12AQ9NP84 129 aa22.08■■□□□ 1.13
HOMER3-205ENST00000542541 PFDN4Q9NQP4 134 aa22.08■■□□□ 1.13
HOMER3-205ENST00000542541 IRAK4Q9NWZ3 460 aa22.08■■□□□ 1.13
HOMER3-205ENST00000542541 OCIAD1Q9NX40 245 aa22.08■■□□□ 1.13
HOMER3-205ENST00000542541 SIDT1Q9NXL6 827 aaKnown RBP22.08■■□□□ 1.13
HOMER3-205ENST00000542541 FIS1Q9Y3D6 152 aa22.08■■□□□ 1.13
HOMER3-205ENST00000542541 LOXL2Q9Y4K0 774 aa22.08■■□□□ 1.13
HOMER3-205ENST00000542541 TCP11X1B4DZS4 312 aa22.07■■□□□ 1.12
HOMER3-205ENST00000542541 B4E171 279 aa22.07■■□□□ 1.12
HOMER3-205ENST00000542541 TMEM150CB9EJG8 249 aa22.07■■□□□ 1.12
HOMER3-205ENST00000542541 FOXE1O00358 373 aaPredicted RBP22.07■■□□□ 1.12
HOMER3-205ENST00000542541 EIF2S1P05198 315 aaKnown RBP22.07■■□□□ 1.12
HOMER3-205ENST00000542541 SERPIND1P05546 499 aa22.07■■□□□ 1.12
HOMER3-205ENST00000542541 TSPAN7P41732 249 aa22.07■■□□□ 1.12
HOMER3-205ENST00000542541 RGS1Q08116 209 aa22.07■■□□□ 1.12
HOMER3-205ENST00000542541 DDX39BQ13838 428 aaKnown RBP22.07■■□□□ 1.12
HOMER3-205ENST00000542541 SGO1Q5FBB7 561 aa22.07■■□□□ 1.12
HOMER3-205ENST00000542541 WASHC2DQ5SRD0 308 aa22.07■■□□□ 1.12
HOMER3-205ENST00000542541 TMPRSS7Q7RTY8 843 aa22.07■■□□□ 1.12
HOMER3-205ENST00000542541 WDR36Q8NI36 951 aaKnown RBP22.07■■□□□ 1.12
HOMER3-205ENST00000542541 CCT6BQ92526 530 aa22.07■■□□□ 1.12
HOMER3-205ENST00000542541 ZNF501Q96CX3 271 aaPredicted RBP22.07■■□□□ 1.12
HOMER3-205ENST00000542541 TM4SF19Q96DZ7 209 aa22.07■■□□□ 1.12
HOMER3-205ENST00000542541 ZNF285Q96NJ3 590 aa22.07■■□□□ 1.12
HOMER3-205ENST00000542541 FBXO8Q9NRD0 319 aa22.07■■□□□ 1.12
HOMER3-205ENST00000542541 PSD3Q9NYI0 1048 aa22.07■■□□□ 1.12
HOMER3-205ENST00000542541 RARRES3Q9UL19 164 aa22.07■■□□□ 1.12
HOMER3-205ENST00000542541 SLCO1B7G3V0H7 640 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 AGRPO00253 132 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 ZSCAN9O15535 394 aaPredicted RBP22.06■■□□□ 1.12
HOMER3-205ENST00000542541 NDUFS4O43181 175 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 HCRTR1O43613 425 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 OR2B3O76000 313 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 SERPINA6P08185 405 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 NEK2P51955 445 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 ITGA1P56199 1179 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 CYP4F2P78329 520 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 MC2RQ01718 297 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 TUBB8Q3ZCM7 444 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 VN1R4Q7Z5H5 301 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 CSNK1A1LQ8N752 337 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 ZNF473Q8WTR7 871 aaKnown RBP22.06■■□□□ 1.12
HOMER3-205ENST00000542541 MTFMTQ96DP5 389 aaKnown RBP22.06■■□□□ 1.12
HOMER3-205ENST00000542541 PRR11Q96HE9 360 aaPredicted RBP22.06■■□□□ 1.12
HOMER3-205ENST00000542541 MTERF1Q99551 399 aaKnown RBP22.06■■□□□ 1.12
HOMER3-205ENST00000542541 CCT7Q99832 543 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 SLCO1B3Q9NPD5 702 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 ENAMQ9NRM1 1142 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 DNAJC15Q9Y5T4 150 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 POLR1CO15160 346 aaPredicted RBP22.06■■□□□ 1.12
HOMER3-205ENST00000542541 JMJD7P0C870 316 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 HSD3B1P14060 373 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 HSD3B2P26439 372 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 SERPINB3P29508 390 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 HK2P52789 917 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 GYS2P54840 703 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 TLDC1Q6P9B6 456 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 MTERF4Q7Z6M4 381 aaKnown RBP22.06■■□□□ 1.12
HOMER3-205ENST00000542541 BMPERQ8N8U9 685 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 GBP7Q8N8V2 638 aaPredicted RBP22.06■■□□□ 1.12
HOMER3-205ENST00000542541 PIWIL2Q8TC59 973 aaKnown RBP22.06■■□□□ 1.12
HOMER3-205ENST00000542541 CREB3L4Q8TEY5 395 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 USP7Q93009 1102 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 CMTM7Q96FZ5 175 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 BRF2Q9HAW0 419 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 NMRK1Q9NWW6 199 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 PPT2Q9UMR5 302 aa22.06■■□□□ 1.12
HOMER3-205ENST00000542541 URADA6NGE7 173 aa22.05■■□□□ 1.12
HOMER3-205ENST00000542541 PLD2O14939 933 aa22.05■■□□□ 1.12
HOMER3-205ENST00000542541 PDYNP01213 254 aa22.05■■□□□ 1.12
HOMER3-205ENST00000542541 CCL4P13236 92 aa22.05■■□□□ 1.12
HOMER3-205ENST00000542541 PTX3P26022 381 aaPredicted RBP22.05■■□□□ 1.12
HOMER3-205ENST00000542541 RAB15P59190 212 aa22.05■■□□□ 1.12
HOMER3-205ENST00000542541 GRM7Q14831 915 aa22.05■■□□□ 1.12
HOMER3-205ENST00000542541 UGT3A2Q3SY77 523 aa22.05■■□□□ 1.12
HOMER3-205ENST00000542541 RNF165Q6ZSG1 346 aa22.05■■□□□ 1.12
HOMER3-205ENST00000542541 FAM47EQ6ZV65 393 aa22.05■■□□□ 1.12
HOMER3-205ENST00000542541 CHSY3Q70JA7 882 aa22.05■■□□□ 1.12
HOMER3-205ENST00000542541 PPP1R3BQ86XI6 285 aa22.05■■□□□ 1.12
HOMER3-205ENST00000542541 OR1L3Q8NH93 324 aa22.05■■□□□ 1.12
HOMER3-205ENST00000542541 NT5CQ8TCD5 201 aa22.05■■□□□ 1.12
HOMER3-205ENST00000542541 DMRT3Q9NQL9 472 aa22.05■■□□□ 1.12
HOMER3-205ENST00000542541 PNPOQ9NVS9 261 aa22.05■■□□□ 1.12
HOMER3-205ENST00000542541 SLC39A1Q9NY26 324 aa22.05■■□□□ 1.12
HOMER3-205ENST00000542541 VTI1BQ9UEU0 232 aa22.05■■□□□ 1.12
HOMER3-205ENST00000542541 COL27A1Q8IZC6 1860 aaPredicted RBP22.04■■□□□ 1.12
HOMER3-205ENST00000542541 SERTM1A2A2V5 107 aa22.04■■□□□ 1.12
HOMER3-205ENST00000542541 MAGEB17A8MXT2 336 aa22.04■■□□□ 1.12
HOMER3-205ENST00000542541 TMEM233B4DJY2 109 aa22.04■■□□□ 1.12
HOMER3-205ENST00000542541 VIMP08670 466 aaKnown RBP22.04■■□□□ 1.12
HOMER3-205ENST00000542541 EMP3P54852 163 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms