RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 LRIF1Q5T3J3 769 aa14.25□□□□□ -0.13
DDX55-209ENST00000542286 RIBC2Q9H4K1 309 aa14.25□□□□□ -0.13
DDX55-209ENST00000542286 PRDM8Q9NQV8 689 aa14.25□□□□□ -0.13
DDX55-209ENST00000542286 C8orf4Q9NR00 106 aa14.25□□□□□ -0.13
DDX55-209ENST00000542286 VPS29Q9UBQ0 182 aa14.25□□□□□ -0.13
DDX55-209ENST00000542286 IL36AQ9UHA7 158 aa14.25□□□□□ -0.13
DDX55-209ENST00000542286 ACSL6Q9UKU0 697 aa14.25□□□□□ -0.13
DDX55-209ENST00000542286 CFAP20Q9Y6A4 193 aaKnown RBP14.25□□□□□ -0.13
DDX55-209ENST00000542286 A0A0C4DFX4 3053 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 ERN1O75460 977 aaKnown RBP14.24□□□□□ -0.13
DDX55-209ENST00000542286 SCELO95171 688 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 PTPN2P17706 415 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 FMO3P31513 532 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 PRMT2P55345 433 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 RPS13P62277 151 aaKnown RBP14.24□□□□□ -0.13
DDX55-209ENST00000542286 RAE1P78406 368 aaKnown RBP14.24□□□□□ -0.13
DDX55-209ENST00000542286 GAB1Q13480 694 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 RAPSNQ13702 412 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 ZNF77Q15935 545 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 SMN1Q16637 294 aaKnown RBP14.24□□□□□ -0.13
DDX55-209ENST00000542286 PLEKHS1Q5SXH7 462 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 LIPIQ6XZB0 460 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 Q6ZPB1 254 aaPredicted RBP14.24□□□□□ -0.13
DDX55-209ENST00000542286 THAP5Q7Z6K1 395 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 TRAPPC5Q8IUR0 188 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 SYTL1Q8IYJ3 562 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 C8orf59Q8N0T1 100 aaPredicted RBP14.24□□□□□ -0.13
DDX55-209ENST00000542286 MRPL43Q8N983 215 aaKnown RBP14.24□□□□□ -0.13
DDX55-209ENST00000542286 CHDHQ8NE62 594 aaPredicted RBP14.24□□□□□ -0.13
DDX55-209ENST00000542286 HUS1BQ8NHY5 278 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 WDR20Q8TBZ3 569 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 ZFP90Q8TF47 636 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 PYURFQ96I23 114 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 FUNDC2Q9BWH2 189 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 EMILIN2Q9BXX0 1053 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 AKIP1Q9NQ31 210 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 SH3BP4Q9P0V3 963 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 RAPGEFL1Q9UHV5 662 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 IFT52Q9Y366 437 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 LTBP2Q14767 1821 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 GNG14A0A1W2PPG7 69 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 GABRR3A8MPY1 467 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 ABCB7O75027 752 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 KCNK5O95279 499 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 FKBP9O95302 570 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 HNRNPFP52597 415 aaKnown RBP14.24□□□□□ -0.13
DDX55-209ENST00000542286 ACSM2AQ08AH3 577 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 CAMK2BQ13554 666 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 NUMA1Q14980 2115 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 ZNF284Q2VY69 593 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 ACSM2BQ68CK6 577 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 FKBP9P1Q75LS8 142 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 PTOV1Q86YD1 416 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 BTN2A2Q8WVV5 523 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 GLYATL1Q969I3 302 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 FKBP10Q96AY3 582 aa14.24□□□□□ -0.13
DDX55-209ENST00000542286 FAM220BPB1ANY3 271 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 NPC1O15118 1278 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 SPINT1O43278 529 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 MMP20O60882 483 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 TGFB1P01137 390 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 PRPS2P11908 318 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 CRHBPP24387 322 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 HNMTP50135 292 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 DPY19L1Q2PZI1 675 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 ZNF385BQ569K4 471 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.23□□□□□ -0.13
DDX55-209ENST00000542286 ATG9BQ674R7 924 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 BRAT1Q6PJG6 821 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 METTL3Q86U44 580 aaKnown RBP14.23□□□□□ -0.13
DDX55-209ENST00000542286 OR5AK3PQ8NH89 298 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 OR51B5Q9H339 312 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 RMND5AQ9H871 391 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 ASIC5Q9NY37 505 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 KNL1Q8NG31 2342 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 LOC100130705A0A1B0GUX0 176 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 PSMD11O00231 422 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 SLCO2B1O94956 709 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 GSTM1P09488 218 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 ANXA4P09525 319 aaPredicted RBP14.23□□□□□ -0.13
DDX55-209ENST00000542286 CRYBA2P53672 197 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 CAMK1Q14012 370 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 DHCR24Q15392 516 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 PRR23BQ6ZRT6 265 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 DCP2Q8IU60 420 aaKnown RBP14.23□□□□□ -0.13
DDX55-209ENST00000542286 SPARTQ8N0X7 666 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 Q8N9G6 341 aaPredicted RBP14.23□□□□□ -0.13
DDX55-209ENST00000542286 OR7G3Q8NG95 312 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 NELL1Q92832 810 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 CEP44Q9C0F1 390 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 CERS4Q9HA82 394 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 POLE4Q9NR33 117 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 SIRT5Q9NXA8 310 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 MAN2B2Q9Y2E5 1009 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 LRRK1Q38SD2 2015 aa14.23□□□□□ -0.13
DDX55-209ENST00000542286 HELZP42694 1942 aaKnown RBP14.23□□□□□ -0.13
DDX55-209ENST00000542286 CYP17A1P05093 508 aa14.22□□□□□ -0.13
DDX55-209ENST00000542286 MPC1LP0DKB6 136 aa14.22□□□□□ -0.13
DDX55-209ENST00000542286 CYP2A6P11509 494 aaPredicted RBP14.22□□□□□ -0.13
DDX55-209ENST00000542286 ALDH4A1P30038 563 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms