RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 COL20A1Q9P218 1284 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 IFT80Q9P2H3 777 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 WARS2Q9UGM6 360 aaKnown RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ZNF639Q9UID6 485 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 USP18Q9UMW8 372 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 STUB1Q9UNE7 303 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 KCNIP3Q9Y2W7 256 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ANKRD36CQ5JPF3 1778 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 MYH3P11055 1940 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 BRWD3Q6RI45 1802 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 TAF1LQ8IZX4 1826 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 DDX60Q8IY21 1712 aaKnown RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 LRP6O75581 1613 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 RREB1Q92766 1687 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 A0A0U1RQV5 110 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 LOC100506127A0A0U1RQW1 187 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 FAM237BA0A1B0GVD1 139 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 A0A1W2PQ45 241 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 RPS10-NUDT3A0A1W2PQS6 291 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 A0A1W2PQY0 241 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 NCF1BA6NI72 391 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 RRN3P2A6NIE6 340 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 WTIPA6NIX2 430 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 NCF1CA8MVU1 366 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 KCNU1A8MYU2 1149 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 KPNA7A9QM74 516 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 E7ENX8 843 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 H7BY64 318 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 J3KRW8 73 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 DNASE2O00115 360 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 AIPO00170 330 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 MASP2O00187 686 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 SLC28A1O00337 649 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 PPP6CO00743 305 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 UBE2CO00762 179 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 SCAMP1O15126 338 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 NOBOXO60393 691 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 PLIN3O60664 434 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 LPXNO60711 386 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 H2AFYO75367 372 aaKnown RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 SCO1O75880 301 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 TGFB1P01137 390 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 CRHP06850 196 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 HEXAP06865 529 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 GP1BAP07359 652 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 FGF2P09038 288 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 ACAA1P09110 424 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 SPARCP09486 303 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 IFIT1P09914 478 aaKnown RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 CBSLP0DN79 551 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 NR2F1P10589 423 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 UMPSP11172 480 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 RALAP11233 206 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 CYP19A1P11511 503 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 PKMP14618 531 aaKnown RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 OGNP20774 298 aaKnown RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 C5AR1P21730 350 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 PAICSP22234 425 aaKnown RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 CBLP22681 906 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 GLRA2P23416 452 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 ADRA1DP25100 572 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 MAPK3P27361 379 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 EPHA3P29320 983 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 HOXA11P31270 313 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 APOBEC3AP31941 199 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 YWHABP31946 246 aaKnown RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 CCR7P32248 378 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 EPHX2P34913 555 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 CBSP35520 551 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 DPP6P42658 865 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 MAGEA6P43360 314 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 CPA2P48052 419 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 SRP9P49458 86 aaKnown RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 NUMBP49757 651 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 DIO1P49895 249 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 CDKN1CP49918 316 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 RBP2P50120 134 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 HNMTP50135 292 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 TOB1P50616 345 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 CCR9P51686 369 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 CEBPGP53567 150 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 ATXN3P54252 364 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 AQP5P55064 265 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 CDH15P55291 814 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 KCNK10P57789 538 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 RAB5BP61020 215 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 CXCR4P61073 352 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 ACTR1AP61163 376 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 HERVK_113P63132 956 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 CHRNDQ07001 517 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 SCN1BQ07699 218 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 SPP2Q13103 211 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 BIKQ13323 160 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 BMPR2Q13873 1038 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 DGCR6Q14129 220 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 CTTNQ14247 550 aaKnown RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 SEC23BQ15437 767 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 CHRNA2Q15822 529 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 ZNF528Q3MIS6 628 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 RALGPS1Q5JS13 557 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms