RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 TMPRSS11BQ86T26 416 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 TBC1D1Q86TI0 1168 aaPredicted RBP9.24□□□□□ -0.93
YBX3-212ENST00000542002 ASPGQ86U10 573 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 APLFQ8IW19 511 aaPredicted RBP9.24□□□□□ -0.93
YBX3-212ENST00000542002 PRSS58Q8IYP2 241 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 EIF1ADQ8N9N8 165 aaKnown RBP9.24□□□□□ -0.93
YBX3-212ENST00000542002 STT3BQ8TCJ2 826 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 CREB3L4Q8TEY5 395 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 THAP4Q8WY91 577 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 FKBP10Q96AY3 582 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 THAP11Q96EK4 314 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 MMABQ96EY8 250 aaPredicted RBP9.24□□□□□ -0.93
YBX3-212ENST00000542002 CD244Q9BZW8 370 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 ING2Q9H160 280 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 VPS11Q9H270 941 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 WDR54Q9H977 334 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 PELI2Q9HAT8 420 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 ZNF71Q9NQZ8 489 aaPredicted RBP9.24□□□□□ -0.93
YBX3-212ENST00000542002 ZNF180Q9UJW8 692 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 MAN2B2Q9Y2E5 1009 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 KCNE2Q9Y6J6 123 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 EXOC1LA0A1B0GW35 172 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 PABPN1LA6NDY0 278 aaKnown RBP9.23□□□□□ -0.93
YBX3-212ENST00000542002 ESPNB1AK53 854 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 SUPT3HB4E1H0 165 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 SGK494L7N484 410 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 TXNDC9O14530 226 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 SOCS6O14544 535 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 NDUFS4O43181 175 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 KLK8O60259 260 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 ALOX12BO75342 701 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 SUPT3HO75486 399 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 JRKO75564 520 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 SMIM10L1P0DMW3 83 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 PIM1P11309 404 aaPredicted RBP9.23□□□□□ -0.93
YBX3-212ENST00000542002 IL1RNP18510 177 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 GNAZP19086 355 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 NR1D1P20393 614 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 FBLP22087 321 aaKnown RBP9.23□□□□□ -0.93
YBX3-212ENST00000542002 TNFRSF8P28908 595 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 FOLR3P41439 243 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 CCL11P51671 97 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 CDC16Q13042 620 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 DSG2Q14126 1118 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 DOC2AQ14183 400 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 ACAP2Q15057 778 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 RBBP5Q15291 538 aaKnown RBP9.23□□□□□ -0.93
YBX3-212ENST00000542002 FAM83EQ2M2I3 478 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 ATG9BQ674R7 924 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 KIRREL2Q6UWL6 708 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 TIFABQ6ZNK6 161 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 MRGPREQ86SM8 312 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 AFAP1L2Q8N4X5 818 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 CAMKVQ8NCB2 501 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 OR5T3Q8NGG3 340 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 RHEBL1Q8TAI7 183 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 MZB1Q8WU39 189 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 SMIM10Q96HG1 83 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 C17orf62Q9BQA9 187 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 DRC3Q9H069 523 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 DNAJC11Q9NVH1 559 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 P4HTMQ9NXG6 502 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 WWOXQ9NZC7 414 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 TRPC4Q9UBN4 977 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 ZNF282Q9UDV7 671 aaPredicted RBP9.23□□□□□ -0.93
YBX3-212ENST00000542002 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.23□□□□□ -0.93
YBX3-212ENST00000542002 ZFP69BQ9UJL9 534 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 PADI2Q9Y2J8 665 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 DYRK1BQ9Y463 629 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 HS3ST3B1Q9Y662 390 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 V9GYY5 206 aaPredicted RBP9.23□□□□□ -0.93
YBX3-212ENST00000542002 FER1L5A0AVI2 2057 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 FAM208BQ5VWN6 2430 aa9.23□□□□□ -0.93
YBX3-212ENST00000542002 PCM1Q15154 2024 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 PIEZO2Q9H5I5 2752 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 ATRXP46100 2492 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 SEC16AO15027 2179 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 A6NL46 340 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 CCNT2O60583 730 aaKnown RBP9.22□□□□□ -0.93
YBX3-212ENST00000542002 CEACAM4O75871 244 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 KRT38O76015 456 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 WFS1O76024 890 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 SIX3O95343 332 aaPredicted RBP9.22□□□□□ -0.93
YBX3-212ENST00000542002 BMP10O95393 424 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 NSA2O95478 260 aaKnown RBP9.22□□□□□ -0.93
YBX3-212ENST00000542002 SERPIND1P05546 499 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 CD63P08962 238 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 SNRPAP09012 282 aaKnown RBP9.22□□□□□ -0.93
YBX3-212ENST00000542002 MMP11P24347 488 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 GRK3P35626 688 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 AHRP35869 848 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 HNF4AP41235 474 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 SERPINB9P50453 376 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 VSNL1P62760 191 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 Q0VFX4 171 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 PWP1Q13610 501 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 E2F2Q14209 437 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 SLBPQ14493 270 aaKnown RBP eCLIP9.22□□□□□ -0.93
YBX3-212ENST00000542002 PDK4Q16654 411 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 PFKFB4Q16877 469 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms