RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 VILLO15195 856 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 CSF2P04141 144 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 PABPC4LP0CB38 370 aaKnown RBP8.35□□□□□ -1.07
THBS3-210ENST00000541576 HSD3B1P14060 373 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 NME1P15531 152 aaKnown RBP8.35□□□□□ -1.07
THBS3-210ENST00000541576 PRPH2P23942 346 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 HSD3B2P26439 372 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 SHMT2P34897 504 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 CDH15P55291 814 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 MEF2AQ02078 507 aaPredicted RBP8.35□□□□□ -1.07
THBS3-210ENST00000541576 STX5Q13190 355 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 KIAA0040Q15053 153 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 KLHL35Q6PF15 583 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 CYP20A1Q6UW02 462 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 NET1Q7Z628 596 aaPredicted RBP8.35□□□□□ -1.07
THBS3-210ENST00000541576 RETREG3Q86VR2 466 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 LAS2Q8IYD9 372 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 KRT78Q8N1N4 520 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 KYQ8NBH2 561 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 HUS1BQ8NHY5 278 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 JPH3Q8WXH2 748 aaPredicted RBP8.35□□□□□ -1.07
THBS3-210ENST00000541576 DNASE2BQ8WZ79 361 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 CMTM7Q96FZ5 175 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 LRGUKQ96M69 825 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 SPNS1Q9H2V7 528 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 EFCAB1Q9HAE3 211 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 PELI2Q9HAT8 420 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 BRF2Q9HAW0 419 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 CUEDC1Q9NWM3 386 aaPredicted RBP8.35□□□□□ -1.07
THBS3-210ENST00000541576 UBAP1Q9NZ09 502 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 OR6C2Q9NZP2 312 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 ZIM2Q9NZV7 527 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 PCDHB11Q9Y5F2 797 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 USP34Q70CQ2 3546 aa8.35□□□□□ -1.07
THBS3-210ENST00000541576 OR5K4A6NMS3 321 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 TMX2-CTNND1H3BSU7 103 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 ANKRD28O15084 1053 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 TPD52L2O43399 206 aaKnown RBP8.34□□□□□ -1.07
THBS3-210ENST00000541576 LAMTOR5O43504 91 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 SLC22A3O75751 556 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 VIPP01282 170 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 CAPN3P20807 821 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 ENTPD1P49961 510 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 CCR8P51685 355 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 DCTN2Q13561 401 aaKnown RBP8.34□□□□□ -1.07
THBS3-210ENST00000541576 PLCL1Q15111 1095 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 VPS26BQ4G0F5 336 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 CACHD1Q5VU97 1274 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 AMIGO1Q86WK6 493 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 FAM129CQ86XR2 697 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 ABHD11Q8NFV4 315 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 OR4E2Q8NGC2 313 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 PROKR1Q8TCW9 393 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 AIF1LQ9BQI0 150 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 PRMT8Q9NR22 394 aaPredicted RBP8.34□□□□□ -1.07
THBS3-210ENST00000541576 VPS29Q9UBQ0 182 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 THADAQ6YHU6 1953 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 KIR2DS5A0A0G2JLQ3 304 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 A0A0G2JNG1 304 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 MAGEB17A8MXT2 336 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 H7BY64 318 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 KIR2DS3K7RE56 304 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 NR5A2O00482 541 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 XRCC1P18887 633 aaPredicted RBP8.34□□□□□ -1.07
THBS3-210ENST00000541576 CXCR2P25025 360 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 DPP6P42658 865 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 NXPH1P58417 271 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 PRDX1Q06830 199 aaKnown RBP8.34□□□□□ -1.07
THBS3-210ENST00000541576 KIR2DS5Q14953 304 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 ELOCQ15369 112 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 BLOC1S3Q6QNY0 202 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 TMIGD1Q6UXZ0 262 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 ZNF554Q86TJ5 538 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 ZNF740Q8NDX6 193 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 OR2A1Q8NGT9 310 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 GIPC3Q8TF64 312 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 PATE1Q8WXA2 126 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 APIPQ96GX9 242 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 PRAP1Q96NZ9 151 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 SRMSQ9H3Y6 488 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 POT1Q9NUX5 634 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 ASIC5Q9NY37 505 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 CPNE7Q9UBL6 633 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 TMED5Q9Y3A6 229 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 AP4B1Q9Y6B7 739 aa8.34□□□□□ -1.07
THBS3-210ENST00000541576 BCAT2O15382 392 aaPredicted RBP8.33□□□□□ -1.08
THBS3-210ENST00000541576 NRP2O60462 931 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 TFAP2AP05549 437 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 MAPK1P28482 360 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 CSNK1EP49674 416 aaKnown RBP8.33□□□□□ -1.08
THBS3-210ENST00000541576 AFF3P51826 1226 aaKnown RBP8.33□□□□□ -1.08
THBS3-210ENST00000541576 RAP1GDS1P52306 607 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 PHEXP78562 749 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 TBL3Q12788 808 aaKnown RBP8.33□□□□□ -1.08
THBS3-210ENST00000541576 ART3Q13508 389 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 PTGR1Q14914 329 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 CACNA1EQ15878 2313 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 REP15Q6BDI9 236 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 PGM2L1Q6PCE3 622 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 WDR5BQ86VZ2 330 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms