RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 PPP1R16AQ96I34 528 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 ZNF583Q96ND8 569 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 PSKH2Q96QS6 385 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 BBS4Q96RK4 519 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 APOL4Q9BPW4 351 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 ITPAQ9BY32 194 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 ZBTB20Q9HC78 741 aaPredicted RBP5.07□□□□□ -1.6
PROM1-220ENST00000540805 ZFP14Q9HCL3 533 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 RANGRFQ9HD47 186 aaPredicted RBP5.07□□□□□ -1.6
PROM1-220ENST00000540805 BRD7Q9NPI1 651 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 RNF186Q9NXI6 227 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 MARCH4Q9P2E8 410 aaPredicted RBP5.07□□□□□ -1.6
PROM1-220ENST00000540805 TMEFF2Q9UIK5 374 aaPredicted RBP5.07□□□□□ -1.6
PROM1-220ENST00000540805 AGO1Q9UL18 857 aaKnown RBP5.07□□□□□ -1.6
PROM1-220ENST00000540805 GMPPBQ9Y5P6 360 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 HSPE1-MOB4S4R3N1 261 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 MYO16Q9Y6X6 1858 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 ELOVL7A1L3X0 281 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 OR2A25A4D2G3 310 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 ARVCFO00192 962 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 CXCR6O00574 342 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 MITFO75030 526 aaPredicted RBP5.07□□□□□ -1.6
PROM1-220ENST00000540805 MLYCDO95822 493 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 KRT6AP02538 564 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 KRT6BP04259 564 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 ALAS2P22557 587 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 WARSP23381 471 aaKnown RBP5.07□□□□□ -1.6
PROM1-220ENST00000540805 GDI1P31150 447 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 NRIP1P48552 1158 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 ARSDP51689 593 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 RPS24P62847 133 aaKnown RBP5.07□□□□□ -1.6
PROM1-220ENST00000540805 CD83Q01151 205 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 PRKCDQ05655 676 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 CYP4F3Q08477 520 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 EIF2B5Q13144 721 aaKnown RBP5.07□□□□□ -1.6
PROM1-220ENST00000540805 SLAMF1Q13291 335 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 KEAP1Q14145 624 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 SIM2Q14190 667 aaPredicted RBP5.07□□□□□ -1.6
PROM1-220ENST00000540805 MBTPS1Q14703 1052 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 PTPRCAPQ14761 206 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 KDELC1Q6UW63 502 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 MRPL10Q7Z7H8 261 aaKnown RBP5.07□□□□□ -1.6
PROM1-220ENST00000540805 CRIPAKQ8N1N5 446 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 PARP16Q8N5Y8 322 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 HJURPQ8NCD3 748 aaPredicted RBP5.07□□□□□ -1.6
PROM1-220ENST00000540805 ZMIZ2Q8NF64 920 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 IL17RDQ8NFM7 739 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 OR4M1Q8NGD0 313 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 OR56A4Q8NGH8 313 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 OR10A6Q8NH74 314 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 RASSF5Q8WWW0 418 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 TRIM63Q969Q1 353 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 SLC39A8Q9C0K1 460 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 POPDC3Q9HBV1 291 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 TM9SF3Q9HD45 589 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 RPRD1BQ9NQG5 326 aaKnown RBP5.07□□□□□ -1.6
PROM1-220ENST00000540805 RAPGEFL1Q9UHV5 662 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 CD84Q9UIB8 345 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 GMEB2Q9UKD1 530 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 WBP11Q9Y2W2 641 aaKnown RBP5.07□□□□□ -1.6
PROM1-220ENST00000540805 A3GALT2U3KPV4 340 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 U3KQV3 271 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 OR2AG2A6NM03 316 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 CENPXA8MT69 81 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 INPPL1O15357 1258 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 DFNA5O60443 496 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 ARHGEF15O94989 841 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 RASGRP1O95267 797 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 ADH1CP00326 375 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 LCKP06239 509 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 CYP2A6P11509 494 aaPredicted RBP5.07□□□□□ -1.6
PROM1-220ENST00000540805 PFKLP17858 780 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 PRDX3P30048 256 aaKnown RBP5.07□□□□□ -1.6
PROM1-220ENST00000540805 SOX9P48436 509 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 CYP4F2P78329 520 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 ACSM2AQ08AH3 577 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 ZNF267Q14586 743 aaPredicted RBP5.07□□□□□ -1.6
PROM1-220ENST00000540805 CDK10Q15131 360 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 ACSM2BQ68CK6 577 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 ZNF549Q6P9A3 640 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 ZNF621Q6ZSS3 439 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 GPRIN1Q7Z2K8 1008 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 TAC4Q86UU9 113 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 CCDC28AQ8IWP9 274 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 SIMC1Q8NDZ2 872 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 KBTBD8Q8NFY9 601 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 OR9Q1Q8NGQ5 310 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 LILRB1Q8NHL6 650 aaPredicted RBP5.07□□□□□ -1.6
PROM1-220ENST00000540805 SPPL2AQ8TCT8 520 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 IPCEF1Q8WWN9 437 aaPredicted RBP5.07□□□□□ -1.6
PROM1-220ENST00000540805 KIAA1191Q96A73 305 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 TBCDQ9BTW9 1192 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 GTPBP2Q9BX10 602 aaKnown RBP5.07□□□□□ -1.6
PROM1-220ENST00000540805 NUAK2Q9H093 628 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 SLC25A51Q9H1U9 297 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 MAGIXQ9H6Y5 334 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 ARNT2Q9HBZ2 717 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 CRTAC1Q9NQ79 661 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 ERVW-1Q9UQF0 538 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 PTPRSQ13332 1948 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms