RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 ZC3H7AQ8IWR0 971 aaKnown RBP6.94□□□□□ -1.3
MSH6-209ENST00000538136 KDM1BQ8NB78 822 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 VPS33AQ96AX1 596 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 MIEF2Q96C03 454 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 TMEM237Q96Q45 408 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 PRPF18Q99633 342 aaKnown RBP6.94□□□□□ -1.3
MSH6-209ENST00000538136 FAM60AQ9NP50 221 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 THSD1Q9NS62 852 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 KCND1Q9NSA2 647 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 NMRK1Q9NWW6 199 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 FAF1Q9UNN5 650 aaPredicted RBP6.94□□□□□ -1.3
MSH6-209ENST00000538136 ASB1Q9Y576 335 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 ARID2Q68CP9 1835 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 WDR81Q562E7 1941 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 FAM159BA6NKW6 160 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 E7ENX8 843 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 GNGT2O14610 69 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 ZSCAN9O15535 394 aaPredicted RBP6.94□□□□□ -1.3
MSH6-209ENST00000538136 B3GALT2O43825 422 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 PLIN3O60664 434 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 ZNF888P0CJ79 500 aaPredicted RBP6.94□□□□□ -1.3
MSH6-209ENST00000538136 AOAHP28039 575 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 MC1RQ01726 317 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 TAP2Q03519 686 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 EIF4EBP2Q13542 120 aaPredicted RBP6.94□□□□□ -1.3
MSH6-209ENST00000538136 ZNF750Q32MQ0 723 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 LRRC23Q53EV4 343 aaPredicted RBP6.94□□□□□ -1.3
MSH6-209ENST00000538136 FRMPD2BQ6IN97 320 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 TMPRSS7Q7RTY8 843 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 TRIM69Q86WT6 500 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 LSRQ86X29 649 aaPredicted RBP6.94□□□□□ -1.3
MSH6-209ENST00000538136 SLC22A9Q8IVM8 553 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 TBC1D21Q8IYX1 336 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 TEX19Q8NA77 164 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 OR9I1Q8NGQ6 314 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 ZNF75CPQ92670 426 aaPredicted RBP6.94□□□□□ -1.3
MSH6-209ENST00000538136 ERP27Q96DN0 273 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 GPR22Q99680 433 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 ZFYVE21Q9BQ24 234 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 GORASP1Q9BQQ3 440 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 TREX1Q9NSU2 369 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 AURKCQ9UQB9 309 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 NAALAD2Q9Y3Q0 740 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 MRPS18BQ9Y676 258 aaKnown RBP6.94□□□□□ -1.3
MSH6-209ENST00000538136 ZNF780BQ9Y6R6 833 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 UBDO15205 165 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 PRMT3O60678 531 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 SUN1O94901 812 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 CTSBP07858 339 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 FBLP22087 321 aaKnown RBP6.94□□□□□ -1.3
MSH6-209ENST00000538136 PFN3P60673 137 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 RPS26P62854 115 aaKnown RBP6.94□□□□□ -1.3
MSH6-209ENST00000538136 DLG1Q12959 904 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 PTGR1Q14914 329 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 TTMPQ5BVD1 217 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 METRNLQ641Q3 311 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 SULT1C3Q6IMI6 304 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 WDR93Q6P2C0 686 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 C16orf47Q6ZP98 133 aaPredicted RBP6.94□□□□□ -1.3
MSH6-209ENST00000538136 KLHDC8AQ8IYD2 350 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 KIF2BQ8N4N8 673 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 ZSCAN1Q8NBB4 408 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 VPS37AQ8NEZ2 397 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 DCAKDQ8WVC6 231 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 BIRC8Q96P09 236 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 WDR83Q9BRX9 315 aaKnown RBP6.94□□□□□ -1.3
MSH6-209ENST00000538136 ZDHHC5Q9C0B5 715 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 TWSG1Q9GZX9 223 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 MOCS1Q9NZB8 636 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 POLG2Q9UHN1 485 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 ADAM21Q9UKJ8 722 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 DLGAP4Q9Y2H0 992 aa6.94□□□□□ -1.3
MSH6-209ENST00000538136 CFAP47Q6ZTR5 3102 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 COL12A1Q99715 3063 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 H0Y3Z8 333 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 TPST2O60704 377 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 PIK3R1P27986 724 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 PPP2R1BP30154 601 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 CENPAP49450 140 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 EMP2P54851 167 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 FOXA1P55317 472 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 KCNK10P57789 538 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 SKP1P63208 163 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 KCNJ2P63252 427 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 SLAMF1Q13291 335 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 TAZQ16635 292 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 PPP1R3AQ16821 1122 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 CYP51A1Q16850 503 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 C5orf22Q49AR2 442 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 GPAT3Q53EU6 434 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 ADAMTSL4Q6UY14 1074 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 PRSS41Q7RTY9 318 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 ASPGQ86U10 573 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 ISCA2Q86U28 154 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 DCP2Q8IU60 420 aaKnown RBP6.93□□□□□ -1.3
MSH6-209ENST00000538136 TICAM1Q8IUC6 712 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 CAMKVQ8NCB2 501 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 HUS1BQ8NHY5 278 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 ROPN1BQ9BZX4 212 aaPredicted RBP6.93□□□□□ -1.3
MSH6-209ENST00000538136 MVB12BQ9H7P6 319 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 226.7 ms