RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 IL17RDQ8NFM7 739 aa11.74□□□□□ -0.53
CPSF7-218ENST00000537641 METTL2AQ96IZ6 378 aaKnown RBP11.74□□□□□ -0.53
CPSF7-218ENST00000537641 KCNC2Q96PR1 638 aa11.74□□□□□ -0.53
CPSF7-218ENST00000537641 NUAK2Q9H093 628 aa11.74□□□□□ -0.53
CPSF7-218ENST00000537641 RUBCNLQ9H714 662 aa11.74□□□□□ -0.53
CPSF7-218ENST00000537641 ARL15Q9NXU5 204 aa11.74□□□□□ -0.53
CPSF7-218ENST00000537641 CRNNQ9UBG3 495 aaPredicted RBP11.74□□□□□ -0.53
CPSF7-218ENST00000537641 BTNL2Q9UIR0 455 aa11.74□□□□□ -0.53
CPSF7-218ENST00000537641 ZNF221Q9UK13 617 aa11.74□□□□□ -0.53
CPSF7-218ENST00000537641 PLXNB3Q9ULL4 1909 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 ZNF840PA6NDX5 716 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 TNFRSF11BO00300 401 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 SLC16A5O15375 505 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 ADAM12O43184 909 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 ZW10O43264 779 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 IDH3BO43837 385 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 TSPAN3O60637 253 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 UGDHO60701 494 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 CCNKO75909 580 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 VIPP01282 170 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 TRBC1P01850 177 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 ABCB1P08183 1280 aaPredicted RBP11.73□□□□□ -0.53
CPSF7-218ENST00000537641 COX7A2P14406 83 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 JUPP14923 745 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 TCEA1P23193 301 aaKnown RBP11.73□□□□□ -0.53
CPSF7-218ENST00000537641 C21orf33P30042 268 aaPredicted RBP11.73□□□□□ -0.53
CPSF7-218ENST00000537641 NSG1P42857 185 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 NR4A2P43354 598 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 RGS6P49758 472 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 SP140Q13342 867 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 ELOAQ14241 798 aaKnown RBP11.73□□□□□ -0.53
CPSF7-218ENST00000537641 DEFB115Q30KQ5 88 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 ADGRF1Q5T601 910 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 FRG2Q64ET8 278 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 C19orf48Q6RUI8 117 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 LINGO4Q6UY18 593 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 GALNT10Q86SR1 603 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 ZNF605Q86T29 641 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 CLDN19Q8N6F1 224 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 GALNT6Q8NCL4 622 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 TTC16Q8NEE8 873 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 OR10G2Q8NGC3 310 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 TMCO6Q96DC7 493 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 EGLN2Q96KS0 407 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 FRG2BQ96QU4 278 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 SNX18Q96RF0 628 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 DOHHQ9BU89 302 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 SLC12A9Q9BXP2 914 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 EMILIN2Q9BXX0 1053 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 OR51E2Q9H255 320 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 TP63Q9H3D4 680 aaPredicted RBP11.73□□□□□ -0.53
CPSF7-218ENST00000537641 RMI1Q9H9A7 625 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 IL26Q9NPH9 171 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 FBXL12Q9NXK8 326 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 ZDHHC3Q9NYG2 299 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 EHD3Q9NZN3 535 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 ENOPH1Q9UHY7 261 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 RUVBL1Q9Y265 456 aaKnown RBP11.73□□□□□ -0.53
CPSF7-218ENST00000537641 TMEM98Q9Y2Y6 226 aa11.73□□□□□ -0.53
CPSF7-218ENST00000537641 LOC100506127A0A0U1RQW1 187 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 AGAP14A8MT82 685 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 A8MU76 341 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 CENPBD1B2RD01 187 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 TLL1O43897 1013 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 SOCS5O75159 536 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 STC2O76061 302 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 GJB5O95377 273 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 STSP08842 583 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 BPIP17213 487 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 AOAHP28039 575 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 OR1D2P34982 312 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 TIE1P35590 1138 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 MAPK8P45983 427 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 ALDH9A1P49189 494 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 NEK2P51955 445 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 LRRC74AQ0VAA2 488 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 CHRNA6Q15825 494 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 CDKN3Q16667 212 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 CLPPQ16740 277 aaPredicted RBP11.72□□□□□ -0.53
CPSF7-218ENST00000537641 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.72□□□□□ -0.537e-16■■□□□ 13
CPSF7-218ENST00000537641 UBE2R2Q712K3 238 aaPredicted RBP11.72□□□□□ -0.53
CPSF7-218ENST00000537641 C16orf59Q7L2K0 433 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 ST13P5Q8NFI4 369 aaPredicted RBP11.72□□□□□ -0.53
CPSF7-218ENST00000537641 OR4C15Q8NGM1 316 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 LILRB4Q8NHJ6 448 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 TPD52L3Q96J77 140 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 TPT1P8Q9HAU6 139 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 C3orf14Q9HBI5 128 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 DNAJC11Q9NVH1 559 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 ZNF226Q9NYT6 803 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 CNOT2Q9NZN8 540 aaKnown RBP11.72□□□□□ -0.53
CPSF7-218ENST00000537641 AFF4Q9UHB7 1163 aaKnown RBP11.72□□□□□ -0.53
CPSF7-218ENST00000537641 WBP11Q9Y2W2 641 aaKnown RBP11.72□□□□□ -0.53
CPSF7-218ENST00000537641 SH3D21A4FU49 640 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 EFCAB10A6NFE3 127 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 PDZK1P1A8MUH7 402 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 CAPN5O15484 640 aaPredicted RBP11.72□□□□□ -0.53
CPSF7-218ENST00000537641 COCHO43405 550 aa11.72□□□□□ -0.53
CPSF7-218ENST00000537641 CPSF4O95639 269 aaKnown RBP11.72□□□□□ -0.53
CPSF7-218ENST00000537641 LATS1O95835 1130 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms