RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 S100A16Q96FQ6 103 aaKnown RBP10.35□□□□□ -0.75
CLIP1-209ENST00000537178 KCNC2Q96PR1 638 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 TRMT61BQ9BVS5 477 aaKnown RBP10.35□□□□□ -0.75
CLIP1-209ENST00000537178 TMEM121BQ9BXQ6 578 aaPredicted RBP10.35□□□□□ -0.75
CLIP1-209ENST00000537178 PNO1Q9NRX1 252 aaKnown RBP10.35□□□□□ -0.75
CLIP1-209ENST00000537178 OXSMQ9NWU1 459 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 TMED5Q9Y3A6 229 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 A0A0G2JN53 185 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 C13orf42A0A1B0GVH6 325 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 SLC38A8A6NNN8 435 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 H7C2Y5 167 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 PIM1P11309 404 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-209ENST00000537178 CDH11P55287 796 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 E2F1Q01094 437 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 CD83Q01151 205 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 NTAN1Q96AB6 310 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 PKP4Q99569 1192 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 CARS2Q9HA77 564 aaKnown RBP10.34□□□□□ -0.75
CLIP1-209ENST00000537178 LRRC42Q9Y546 428 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 A0A1B0GVI7 797 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 MYBPHLA2RUH7 354 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 KLRG2A4D1S0 409 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-209ENST00000537178 TGFB1P01137 390 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 IFNA2P01563 188 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 C8AP07357 584 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 ANXA3P12429 323 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 BCKDHAP12694 445 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 GNG2P59768 71 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 HMGCS1Q01581 520 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 ANKDD1AQ495B1 522 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 KREMEN2Q8NCW0 462 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 TMBIM1Q969X1 311 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 SNX27Q96L92 541 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 RBP7Q96R05 134 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 CD180Q99467 661 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 SUV39H2Q9H5I1 410 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 ABCB8Q9NUT2 735 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 ISPDA4D126 451 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 WTIPA6NIX2 430 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-209ENST00000537178 EOMESO95936 686 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 HCKP08631 526 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 ACP5P13686 325 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 PTGIRP43119 386 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 RPL26P61254 145 aaKnown RBP10.34□□□□□ -0.75
CLIP1-209ENST00000537178 SLC3A1Q07837 685 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 C3orf33Q6P1S2 294 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 SNX29P2Q8IUI4 249 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 TMEM156Q8N614 296 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 ZNF431Q8TF32 576 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-209ENST00000537178 CREB3L1Q96BA8 519 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 ASPNQ9BXN1 380 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 TM9SF3Q9HD45 589 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 TMEM9Q9P0T7 183 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 FARSAQ9Y285 508 aaKnown RBP10.34□□□□□ -0.75
CLIP1-209ENST00000537178 CDH10Q9Y6N8 788 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-209ENST00000537178 C2orf92A0A1B0GVN3 265 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 SAP18O00422 153 aaKnown RBP10.34□□□□□ -0.75
CLIP1-209ENST00000537178 MUSKO15146 869 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 DPYSL2Q16555 572 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 ZNF630Q2M218 657 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-209ENST00000537178 CHADLQ6NUI6 762 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 ZER1Q7Z7L7 766 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 C1orf52Q8N6N3 182 aaKnown RBP10.34□□□□□ -0.75
CLIP1-209ENST00000537178 FAM86B1Q8N7N1 296 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 C17orf50Q8WW18 174 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 KCNN1Q92952 543 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 YIPF4Q9BSR8 244 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 SH2B3Q9UQQ2 575 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 ZNF451Q9Y4E5 1061 aa10.34□□□□□ -0.75
CLIP1-209ENST00000537178 LOC100509620A0A075B734 347 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 J3QLW9 94 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 M0QX08 132 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 CCRL2O00421 344 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 ZNF19P17023 458 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 JAM2P57087 298 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 PLGLB1Q02325 96 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 ABHD18Q0P651 414 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 BNIP3Q12983 259 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 GRIK5Q16478 980 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 DECR1Q16698 335 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 TSTQ16762 297 aaKnown RBP10.33□□□□□ -0.76
CLIP1-209ENST00000537178 DUOXA1Q1HG43 343 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 AMZ1Q400G9 498 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 TATDN1Q6P1N9 297 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 ANKRD23Q86SG2 305 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 PHC2Q8IXK0 858 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 OR56A1Q8NGH5 318 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 MAFIPQ8WZ33 124 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 TFAP2BQ92481 460 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 BORCS8Q96FH0 119 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 EBF2Q9HAK2 575 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 NRAPQ86VF7 1730 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 CDC7O00311 574 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 PCDHGA12O60330 932 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 HTR1AP08908 422 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 RBMXP38159 391 aaKnown RBP10.33□□□□□ -0.76
CLIP1-209ENST00000537178 CDKN1CP49918 316 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-209ENST00000537178 INAVAQ3KP66 663 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 CERS5Q8N5B7 392 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 232.8 ms