RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 HIBCHQ6NVY1 386 aaPredicted RBP12.41□□□□□ -0.42
RTN3-207ENST00000536011 PAQR3Q6TCH7 311 aa12.41□□□□□ -0.42
RTN3-207ENST00000536011 CPEB2Q7Z5Q1 589 aaKnown RBP12.41□□□□□ -0.42
RTN3-207ENST00000536011 CATSPER1Q8NEC5 780 aa12.41□□□□□ -0.42
RTN3-207ENST00000536011 FAM45AQ8TCE6 357 aa12.41□□□□□ -0.42
RTN3-207ENST00000536011 SLC13A3Q8WWT9 602 aa12.41□□□□□ -0.42
RTN3-207ENST00000536011 ALKBH8Q96BT7 664 aaKnown RBP12.41□□□□□ -0.42
RTN3-207ENST00000536011 OR1F2PQ96R84 312 aa12.41□□□□□ -0.42
RTN3-207ENST00000536011 DDX47Q9H0S4 455 aaKnown RBP12.41□□□□□ -0.42
RTN3-207ENST00000536011 ATG10Q9H0Y0 220 aa12.41□□□□□ -0.42
RTN3-207ENST00000536011 HCN3Q9P1Z3 774 aa12.41□□□□□ -0.42
RTN3-207ENST00000536011 SLC22A7Q9Y694 548 aa12.41□□□□□ -0.42
RTN3-207ENST00000536011 CELSR2Q9HCU4 2923 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 OR5H15A6NDH6 313 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 NDC80O14777 642 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 LRRTM2O43300 516 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 PRAMEF2O60811 474 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 JRKO75564 520 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 SEC24DO94855 1032 aaPredicted RBP12.4□□□□□ -0.42
RTN3-207ENST00000536011 CLDN1O95832 211 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 AHSGP02765 367 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 STATHP02808 62 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 ITGAMP11215 1152 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 RGS1Q08116 209 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 ILF2Q12905 390 aaKnown RBP12.4□□□□□ -0.42
RTN3-207ENST00000536011 PWP1Q13610 501 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 BTBD16Q32M84 506 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 RBM20Q5T481 1227 aaKnown RBP12.4□□□□□ -0.42
RTN3-207ENST00000536011 HIST2H2BCQ6DN03 193 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 MBOAT1Q6ZNC8 495 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 GPATCH11Q8N954 259 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 MFSD9Q8NBP5 474 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 ABHD11Q8NFV4 315 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 DNAJB8Q8NHS0 232 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 ZCCHC10Q8TBK6 192 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 NR4A3Q92570 626 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 TM4SF19Q96DZ7 209 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 IMMP1LQ96LU5 166 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 ZNF354BQ96LW1 612 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 CYTH2Q99418 400 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 PLA2G3Q9NZ20 509 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 MYO9AB2RTY4 2548 aa12.4□□□□□ -0.42
RTN3-207ENST00000536011 TRBC2A0A5B9 178 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 FEZF1A0PJY2 475 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 SGK494L7N484 410 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 NDUFS4O43181 175 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 RDH16O75452 317 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 RASAL1O95294 804 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 MLYCDO95822 493 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 WDPCPO95876 746 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 STSP08842 583 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 NPPBP16860 134 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 JAK1P23458 1154 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 GABRB3P28472 473 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 ARL4CP56559 192 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 TIAL1Q01085 375 aaKnown RBP eCLIP12.39□□□□□ -0.43
RTN3-207ENST00000536011 FRG1Q14331 258 aaKnown RBP12.39□□□□□ -0.43
RTN3-207ENST00000536011 CSHL1Q14406 222 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 PHKG1Q16816 387 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.39□□□□□ -0.43
RTN3-207ENST00000536011 HECTD2Q5U5R9 776 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 ABHD13Q7L211 337 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 PRSS41Q7RTY9 318 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 STRA8Q7Z7C7 330 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 SLC26A11Q86WA9 606 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 SLC34A3Q8N130 599 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 FBXL8Q96CD0 374 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 CFAP36Q96G28 342 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 SNF8Q96H20 258 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 SARGQ9BW04 601 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 STMN3Q9NZ72 180 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 ZFATQ9P243 1243 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 CHMP2BQ9UQN3 213 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 VWA7Q9Y334 891 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 NAALAD2Q9Y3Q0 740 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 ITPR2Q14571 2701 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 CPAMD8Q8IZJ3 1885 aa12.39□□□□□ -0.43
RTN3-207ENST00000536011 SVILO95425 2214 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 URADA6NGE7 173 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 A8MUI8 341 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 OR1F1O43749 312 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 BANF1O75531 89 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 TSPAN12O95859 305 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 CELA2AP08217 269 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 DCTP40126 519 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 ELK3P41970 407 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 TAS2R50P59544 299 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 DR1Q01658 176 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 RBPJQ06330 500 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 ACTN3Q08043 901 aaPredicted RBP12.38□□□□□ -0.43
RTN3-207ENST00000536011 ABRAXAS2Q15018 415 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 NSDHLQ15738 373 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 MSS51Q4VC12 460 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 TEDDM1Q5T9Z0 273 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 MTFR2Q6P444 385 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 LANCL3Q6ZV70 420 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 ANKRD37Q7Z713 158 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 SLC5A8Q8N695 610 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 HORMAD2Q8N7B1 307 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 KCT2Q8NC54 265 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 438.5 ms