RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 TBR1Q16650 682 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 NDUFA9Q16795 377 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 UGT8Q16880 541 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 TMEM151BQ8IW70 566 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 TMEM151AQ8N4L1 468 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 KCT2Q8NC54 265 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 OR2W6PQ8NHA6 318 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 MOCOSQ96EN8 888 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 WDR34Q96EX3 536 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 CATSPER2Q96P56 530 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 DRC3Q9H069 523 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 SLC26A1Q9H2B4 701 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 MRPL46Q9H2W6 279 aaKnown RBP21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 ZNF304Q9HCX3 659 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 COPG2Q9UBF2 871 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 OPTCQ9UBM4 332 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 ZFP69BQ9UJL9 534 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 CDC14AQ9UNH5 594 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 PADI2Q9Y2J8 665 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 FAM208BQ5VWN6 2430 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 A0A1W2PPM1 405 aa21.6■■□□□ 1.05
SFSWAP-204ENST00000535399 CDC14CA4D256 554 aa21.6■■□□□ 1.05
SFSWAP-204ENST00000535399 FOXO6A8MYZ6 492 aa21.6■■□□□ 1.05
SFSWAP-204ENST00000535399 GOLGA8RI6L899 631 aa21.6■■□□□ 1.05
SFSWAP-204ENST00000535399 TK2O00142 265 aa21.6■■□□□ 1.05
SFSWAP-204ENST00000535399 ITGB2P05107 769 aa21.6■■□□□ 1.05
SFSWAP-204ENST00000535399 SBK3P0C264 359 aa21.6■■□□□ 1.05
SFSWAP-204ENST00000535399 SLC35G6P0C7Q6 338 aa21.6■■□□□ 1.05
SFSWAP-204ENST00000535399 PYGBP11216 843 aa21.6■■□□□ 1.05
SFSWAP-204ENST00000535399 CD22P20273 847 aa21.6■■□□□ 1.05
SFSWAP-204ENST00000535399 PCDH1Q08174 1060 aa21.6■■□□□ 1.05
SFSWAP-204ENST00000535399 PWP1Q13610 501 aa21.6■■□□□ 1.05
SFSWAP-204ENST00000535399 RBBP5Q15291 538 aaKnown RBP21.6■■□□□ 1.05
SFSWAP-204ENST00000535399 PCBP2Q15366 365 aaKnown RBP eCLIP21.6■■□□□ 1.054e-7■□□□□ 9.2
SFSWAP-204ENST00000535399 PCSK4Q6UW60 755 aa21.6■■□□□ 1.05
SFSWAP-204ENST00000535399 SH2D5Q6ZV89 423 aa21.6■■□□□ 1.05
SFSWAP-204ENST00000535399 LCA5Q86VQ0 697 aa21.6■■□□□ 1.05
SFSWAP-204ENST00000535399 NT5CQ8TCD5 201 aa21.6■■□□□ 1.05
SFSWAP-204ENST00000535399 ADAMTS17Q8TE56 1095 aa21.6■■□□□ 1.05
SFSWAP-204ENST00000535399 COL26A1Q96A83 441 aa21.6■■□□□ 1.05
SFSWAP-204ENST00000535399 NT5DC2Q9H857 520 aa21.6■■□□□ 1.05
SFSWAP-204ENST00000535399 CTSFQ9UBX1 484 aa21.6■■□□□ 1.05
SFSWAP-204ENST00000535399 RALYQ9UKM9 306 aaKnown RBP21.6■■□□□ 1.05
SFSWAP-204ENST00000535399 PTRH2Q9Y3E5 179 aaKnown RBP21.6■■□□□ 1.05
SFSWAP-204ENST00000535399 MDC1Q14676 2089 aaKnown RBP21.6■■□□□ 1.05
SFSWAP-204ENST00000535399 A0A0A6YYC8 382 aaPredicted RBP21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 I3L1I5 382 aaPredicted RBP21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 NDUFS4O43181 175 aa21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 CD63P08962 238 aa21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 CXCR2P25025 360 aa21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 CASP2P42575 452 aa21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 DSG2Q14126 1118 aa21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 DOC2AQ14183 400 aa21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 E2F2Q14209 437 aa21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 TBCCQ15814 346 aa21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 NKG7Q16617 165 aa21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 LINC00303Q3SY05 128 aa21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 XKR6Q5GH73 641 aa21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 PRSS41Q7RTY9 318 aa21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 KRT78Q8N1N4 520 aa21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 MREGQ8N565 214 aa21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 TEX9Q8N6V9 391 aa21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 PTGR2Q8N8N7 351 aaPredicted RBP21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 OR2Y1Q8NGV0 311 aa21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 CREB3L4Q8TEY5 395 aa21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 EXTL1Q92935 676 aa21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 PTCD3Q96EY7 689 aaKnown RBP21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 UBL7Q96S82 380 aaPredicted RBP21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 PITHD1Q9GZP4 211 aaPredicted RBP21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 TMEM216Q9P0N5 145 aa21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 TMCO1Q9UM00 188 aa21.59■■□□□ 1.05
SFSWAP-204ENST00000535399 VSTM2BA6NLU5 285 aa21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 ERVH48-1M5A8F1 160 aa21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 CDH16O75309 829 aa21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 WFS1O76024 890 aa21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 SIX3O95343 332 aaPredicted RBP21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 TUBBP07437 444 aa21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 FBLP22087 321 aaKnown RBP21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 IRF8Q02556 426 aa21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 CHIT1Q13231 466 aa21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 DEFB109BQ30KR1 87 aa21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 METTL2BQ6P1Q9 378 aaKnown RBP21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 TMIGD1Q6UXZ0 262 aa21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 AFAP1L2Q8N4X5 818 aa21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 AMER3Q8N944 861 aa21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 TRPV3Q8NET8 790 aa21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 OR9A4Q8NGU2 314 aa21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 ZCCHC10Q8TBK6 192 aa21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 PHF21BQ96EK2 531 aa21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 MMABQ96EY8 250 aaPredicted RBP21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 SPSB2Q99619 263 aa21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 EFCAB11Q9BUY7 163 aa21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 WDR54Q9H977 334 aa21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 ZNF490Q9ULM2 529 aaPredicted RBP21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 POLHQ9Y253 713 aa21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 TNPO3Q9Y5L0 923 aaKnown RBP21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 SLC22A7Q9Y694 548 aa21.58■■□□□ 1.05
SFSWAP-204ENST00000535399 IGSF10Q6WRI0 2623 aa21.58■■□□□ 1.04
SFSWAP-204ENST00000535399 IGLV3-12A0A075B6K2 115 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms