RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 CNTNAP3BQ96NU0 1288 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 GBP5Q96PP8 586 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 NDC1Q9BTX1 674 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 EFCAB11Q9BUY7 163 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 MECRQ9BV79 373 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 CNTNAP3Q9BZ76 1288 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 AICDAQ9GZX7 198 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 GSTO2Q9H4Y5 243 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 ACTR8Q9H981 624 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 VIPAS39Q9H9C1 493 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 SLC22A11Q9NSA0 550 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 ZNF225Q9UK10 706 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 SDK2Q58EX2 2172 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 LOC101059948A0A1B0GTJ6 334 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 TMEM8BA6NDV4 472 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 GOLGA6L10A6NI86 522 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 FOXS1O43638 330 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 SERPIND1P05546 499 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 HBQ1P09105 142 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 ALAS2P22557 587 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 CCR10P46092 362 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 ARSFP54793 590 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 NAGLUP54802 743 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 EMP3P54852 163 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 LAPTM5Q13571 262 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 FAM214AQ32MH5 1076 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 PAGE2BQ5JRK9 111 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 AGBL2Q5U5Z8 902 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 YOD1Q5VVQ6 348 aaPredicted RBP12.5□□□□□ -0.41
TMEM258-202ENST00000535042 LIPJQ5W064 366 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 TMEM214Q6NUQ4 689 aaKnown RBP12.5□□□□□ -0.41
TMEM258-202ENST00000535042 ZNF517Q6ZMY9 492 aaPredicted RBP12.5□□□□□ -0.41
TMEM258-202ENST00000535042 MYLK4Q86YV6 388 aaPredicted RBP12.5□□□□□ -0.41
TMEM258-202ENST00000535042 LAS2Q8IYD9 372 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 TBC1D19Q8N5T2 526 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 ESX1Q8N693 406 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 METTL27Q8N6F8 245 aaPredicted RBP12.5□□□□□ -0.41
TMEM258-202ENST00000535042 CCNYL1Q8N7R7 359 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 L3MBTL4Q8NA19 623 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 CAMKVQ8NCB2 501 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 OR4F6Q8NGB9 312 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 NT5CQ8TCD5 201 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 PPP4R1Q8TF05 950 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.5□□□□□ -0.41
TMEM258-202ENST00000535042 KCNE4Q8WWG9 221 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 ATP6V1E2Q96A05 226 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 CCDC126Q96EE4 140 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 SH3GL2Q99962 352 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 NTMT1Q9BV86 223 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 GATA5Q9BWX5 397 aaPredicted RBP12.5□□□□□ -0.41
TMEM258-202ENST00000535042 SLC7A5P2Q9GIP4 190 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 PITHD1Q9GZP4 211 aaPredicted RBP12.5□□□□□ -0.41
TMEM258-202ENST00000535042 CHST8Q9H2A9 424 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 RHBGQ9H310 441 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 KCNK9Q9NPC2 374 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 LHX9Q9NQ69 397 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 MID2Q9UJV3 735 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 PADI1Q9ULC6 663 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 SRPK3Q9UPE1 567 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 HEATR5BQ9P2D3 2071 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 SPTBP11277 2137 aa12.5□□□□□ -0.41
TMEM258-202ENST00000535042 A0A1B0GX78 115 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 TXNDC9O14530 226 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 UBFD1O14562 309 aaKnown RBP12.49□□□□□ -0.41
TMEM258-202ENST00000535042 TERTO14746 1132 aaKnown RBP12.49□□□□□ -0.41
TMEM258-202ENST00000535042 DSCR3O14972 297 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 PRPF4O43172 522 aaKnown RBP eCLIP12.49□□□□□ -0.41
TMEM258-202ENST00000535042 NDUFS4O43181 175 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 KLK10O43240 276 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 UGDHO60701 494 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 CLDN9O95484 217 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 CAPN1P07384 714 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 BPGMP07738 259 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 F8A1P23610 371 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 HNF4AP41235 474 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 STAT5AP42229 794 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 OR1D4P47884 311 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 CCNG1P51959 295 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 PWP1Q13610 501 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 RBBP7Q16576 425 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 CPSF6Q16630 551 aaKnown RBP eCLIP12.49□□□□□ -0.41
TMEM258-202ENST00000535042 HIST2H2ACQ16777 129 aaPredicted RBP12.49□□□□□ -0.41
TMEM258-202ENST00000535042 MUM1Q2TAK8 710 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 TTMPQ5BVD1 217 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 LIPMQ5VYY2 423 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 HIST2H2AA3Q6FI13 130 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 LETMD1Q6P1Q0 360 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 MED27Q6P2C8 311 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 PRSS41Q7RTY9 318 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 MILR1Q7Z6M3 343 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 SYVN1Q86TM6 617 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 VASH2Q86V25 355 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 SHISA5Q8N114 240 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 RNF175Q8N4F7 328 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 OR7G3Q8NG95 312 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 ZCCHC10Q8TBK6 192 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 ZNF473Q8WTR7 871 aaKnown RBP12.49□□□□□ -0.41
TMEM258-202ENST00000535042 CT55Q8WUE5 264 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 MR1Q95460 341 aa12.49□□□□□ -0.41
TMEM258-202ENST00000535042 DCBLD2Q96PD2 775 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms