RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 XKR6Q5GH73 641 aa10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 GARNL3Q5VVW2 1013 aa10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 CPZQ66K79 652 aa10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 PRMT9Q6P2P2 845 aa10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 PCSK4Q6UW60 755 aa10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 NXPE4Q6UWF7 544 aa10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 VN1R4Q7Z5H5 301 aa10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 MRGPREQ86SM8 312 aa10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 MYLK4Q86YV6 388 aaPredicted RBP10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 CENPLQ8N0S6 344 aaPredicted RBP10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 MFSD9Q8NBP5 474 aa10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 ZNF740Q8NDX6 193 aa10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 ABHD11Q8NFV4 315 aa10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 OR9A4Q8NGU2 314 aa10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 OR2Y1Q8NGV0 311 aa10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 DCAKDQ8WVC6 231 aa10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 THAP4Q8WY91 577 aa10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 MIEF2Q96C03 454 aa10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 CCDC77Q9BR77 488 aa10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 TMEM79Q9BSE2 394 aa10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 SPNS1Q9H2V7 528 aa10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 ANKHQ9HCJ1 492 aa10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 HCN3Q9P1Z3 774 aa10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 OPTCQ9UBM4 332 aa10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 ZNF282Q9UDV7 671 aaPredicted RBP10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 NXT1Q9UKK6 140 aaKnown RBP10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 MRPS2Q9Y399 296 aaKnown RBP10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 KCNMB2Q9Y691 235 aa10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 V9GYY5 206 aaPredicted RBP10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 SCN2AQ99250 2005 aa10.91□□□□□ -0.66
UBASH3B-208ENST00000533451 LAMA5O15230 3695 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 COL6A6A6NMZ7 2263 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 KCNE1BA0A087WTH5 132 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 ZNF860A6NHJ4 632 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 A6NL46 340 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 MKRN2OSH3BPM6 223 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 TAPBPO15533 448 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 LCMT2O60294 686 aaKnown RBP10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 CNOT3O75175 753 aaKnown RBP10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 KLF7O75840 302 aaPredicted RBP10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 KLHL2O95198 593 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 SLU7O95391 586 aaKnown RBP10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 CXCR2P25025 360 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 GCGRP47871 477 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 SLC6A12P48065 614 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 CCL11P51671 97 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 RRADP55042 308 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 MAT1AQ00266 395 aaKnown RBP10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 REEP5Q00765 189 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 NFATC3Q12968 1075 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 SLBPQ14493 270 aaKnown RBP eCLIP10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 SLC29A2Q14542 456 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 ACAP2Q15057 778 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 NKG7Q16617 165 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 SYT16Q17RD7 645 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 COX15Q7KZN9 410 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 OVCH1Q7RTY7 1134 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 ISCA2Q86U28 154 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 KRT78Q8N1N4 520 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 EXD3Q8N9H8 876 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 KCT2Q8NC54 265 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 PDPRQ8NCN5 879 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 LSM14AQ8ND56 463 aaKnown RBP10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 C9orf43Q8TAL5 461 aaPredicted RBP10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 WBP1Q96G27 269 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 POM121Q96HA1 1249 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 CRB3Q9BUF7 120 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 FUT8Q9BYC5 575 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 SEMA4CQ9C0C4 833 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 WDR54Q9H977 334 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 ZNF71Q9NQZ8 489 aaPredicted RBP10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 SLC22A11Q9NSA0 550 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 TBK1Q9UHD2 729 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 G3BP2Q9UN86 482 aaKnown RBP10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 HEMK1Q9Y5R4 338 aaPredicted RBP10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 MED13Q9UHV7 2174 aa10.9□□□□□ -0.66
UBASH3B-208ENST00000533451 ZFHX4Q86UP3 3567 aa10.9□□□□□ -0.67
UBASH3B-208ENST00000533451 TLN1Q9Y490 2541 aaKnown RBP10.89□□□□□ -0.67
UBASH3B-208ENST00000533451 IQANK1A0A1B0GTG1 560 aa10.89□□□□□ -0.67
UBASH3B-208ENST00000533451 SGK494L7N484 410 aa10.89□□□□□ -0.67
UBASH3B-208ENST00000533451 RDH16O75452 317 aa10.89□□□□□ -0.67
UBASH3B-208ENST00000533451 RECKO95980 971 aa10.89□□□□□ -0.67
UBASH3B-208ENST00000533451 ALBP02768 609 aa10.89□□□□□ -0.67
UBASH3B-208ENST00000533451 SNRPAP09012 282 aaKnown RBP10.89□□□□□ -0.67
UBASH3B-208ENST00000533451 ZNF888P0CJ79 500 aaPredicted RBP10.89□□□□□ -0.67
UBASH3B-208ENST00000533451 C1GALT1C1LP0DN25 315 aa10.89□□□□□ -0.67
UBASH3B-208ENST00000533451 SFTPCP11686 197 aa10.89□□□□□ -0.67
UBASH3B-208ENST00000533451 SLCO1A2P46721 670 aa10.89□□□□□ -0.67
UBASH3B-208ENST00000533451 KCNC1P48547 511 aa10.89□□□□□ -0.67
UBASH3B-208ENST00000533451 AGTR2P50052 363 aa10.89□□□□□ -0.67
UBASH3B-208ENST00000533451 SKP1P63208 163 aa10.89□□□□□ -0.67
UBASH3B-208ENST00000533451 IRF8Q02556 426 aa10.89□□□□□ -0.67
UBASH3B-208ENST00000533451 KLC1Q07866 573 aa10.89□□□□□ -0.67
UBASH3B-208ENST00000533451 RAPSNQ13702 412 aa10.89□□□□□ -0.67
UBASH3B-208ENST00000533451 SSPNQ14714 243 aa10.89□□□□□ -0.67
UBASH3B-208ENST00000533451 PFKFB4Q16877 469 aa10.89□□□□□ -0.67
UBASH3B-208ENST00000533451 TSNAXIP1Q2TAA8 658 aa10.89□□□□□ -0.67
UBASH3B-208ENST00000533451 MINDY4Q4G0A6 757 aa10.89□□□□□ -0.67
UBASH3B-208ENST00000533451 VWA2Q5GFL6 755 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms