RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 B3GNTL1Q67FW5 361 aaPredicted RBP16.85■□□□□ 0.29
SMG1-203ENST00000532700 DUPD1Q68J44 220 aa16.85■□□□□ 0.29
SMG1-203ENST00000532700 C8orf74Q6P047 294 aa16.85■□□□□ 0.29
SMG1-203ENST00000532700 CTAGE4Q8IX94 777 aa16.85■□□□□ 0.29
SMG1-203ENST00000532700 SPATA6LQ8N4H0 392 aa16.85■□□□□ 0.29
SMG1-203ENST00000532700 SIRT6Q8N6T7 355 aa16.85■□□□□ 0.29
SMG1-203ENST00000532700 GABPB2Q8TAK5 448 aaPredicted RBP16.85■□□□□ 0.29
SMG1-203ENST00000532700 BRIX1Q8TDN6 353 aaKnown RBP16.85■□□□□ 0.29
SMG1-203ENST00000532700 NEIL2Q969S2 332 aa16.85■□□□□ 0.29
SMG1-203ENST00000532700 PSMG3-AS1Q96PY0 264 aa16.85■□□□□ 0.29
SMG1-203ENST00000532700 WDR77Q9BQA1 342 aaPredicted RBP16.85■□□□□ 0.29
SMG1-203ENST00000532700 ILKAPQ9H0C8 392 aaPredicted RBP16.85■□□□□ 0.29
SMG1-203ENST00000532700 MKKSQ9NPJ1 570 aaPredicted RBP16.85■□□□□ 0.29
SMG1-203ENST00000532700 MKL2Q9ULH7 1088 aa16.85■□□□□ 0.29
SMG1-203ENST00000532700 CDC14AQ9UNH5 594 aa16.85■□□□□ 0.29
SMG1-203ENST00000532700 MTO1Q9Y2Z2 717 aaKnown RBP16.85■□□□□ 0.29
SMG1-203ENST00000532700 PRRC2CQ9Y520 2896 aaKnown RBP16.84■□□□□ 0.29
SMG1-203ENST00000532700 LOC102723996A0A087X1L8 192 aa16.84■□□□□ 0.29
SMG1-203ENST00000532700 HEXBP07686 556 aa16.84■□□□□ 0.29
SMG1-203ENST00000532700 ANXA5P08758 320 aa16.84■□□□□ 0.29
SMG1-203ENST00000532700 ITGAMP11215 1152 aa16.84■□□□□ 0.29
SMG1-203ENST00000532700 SOX11P35716 441 aa16.84■□□□□ 0.29
SMG1-203ENST00000532700 ST13P50502 369 aaKnown RBP16.84■□□□□ 0.29
SMG1-203ENST00000532700 OLR1P78380 273 aa16.84■□□□□ 0.29
SMG1-203ENST00000532700 CAV1Q03135 178 aa16.84■□□□□ 0.29
SMG1-203ENST00000532700 SRSF11Q05519 484 aaKnown RBP16.84■□□□□ 0.29
SMG1-203ENST00000532700 AGAP7PQ5VUJ5 663 aa16.84■□□□□ 0.29
SMG1-203ENST00000532700 CAPN13Q6MZZ7 669 aaPredicted RBP16.84■□□□□ 0.29
SMG1-203ENST00000532700 TMEM205Q6UW68 189 aa16.84■□□□□ 0.29
SMG1-203ENST00000532700 ASPGQ86U10 573 aa16.84■□□□□ 0.29
SMG1-203ENST00000532700 IQCKQ8N0W5 287 aa16.84■□□□□ 0.29
SMG1-203ENST00000532700 ZADH2Q8N4Q0 377 aa16.84■□□□□ 0.29
SMG1-203ENST00000532700 ANKRD53Q8N9V6 530 aa16.84■□□□□ 0.29
SMG1-203ENST00000532700 MFSD9Q8NBP5 474 aa16.84■□□□□ 0.29
SMG1-203ENST00000532700 ABHD11Q8NFV4 315 aa16.84■□□□□ 0.29
SMG1-203ENST00000532700 OR4K1Q8NGD4 311 aa16.84■□□□□ 0.29
SMG1-203ENST00000532700 PDLIM5Q96HC4 596 aaKnown RBP16.84■□□□□ 0.29
SMG1-203ENST00000532700 VPS39Q96JC1 886 aa16.84■□□□□ 0.29
SMG1-203ENST00000532700 AGAP4Q96P64 663 aa16.84■□□□□ 0.29
SMG1-203ENST00000532700 BARD1Q99728 777 aaKnown RBP16.84■□□□□ 0.29
SMG1-203ENST00000532700 SAYSD1Q9NPB0 183 aa16.84■□□□□ 0.29
SMG1-203ENST00000532700 C14orf105Q9NVL8 296 aa16.84■□□□□ 0.29
SMG1-203ENST00000532700 PLA2G3Q9NZ20 509 aa16.84■□□□□ 0.29
SMG1-203ENST00000532700 CORO1CQ9ULV4 474 aaPredicted RBP16.84■□□□□ 0.29
SMG1-203ENST00000532700 NSG1A0A0A6YYJ2 146 aa16.83■□□□□ 0.28
SMG1-203ENST00000532700 NSA2O95478 260 aaKnown RBP16.83■□□□□ 0.28
SMG1-203ENST00000532700 CBX6O95503 412 aa16.83■□□□□ 0.28
SMG1-203ENST00000532700 XCR1P46094 333 aa16.83■□□□□ 0.28
SMG1-203ENST00000532700 GPX6P59796 221 aa16.83■□□□□ 0.28
SMG1-203ENST00000532700 HYAL2Q12891 473 aa16.83■□□□□ 0.28
SMG1-203ENST00000532700 TSNQ15631 228 aaKnown RBP16.83■□□□□ 0.28
SMG1-203ENST00000532700 FBXO48Q5FWF7 155 aa16.83■□□□□ 0.28
SMG1-203ENST00000532700 UBAP2Q5T6F2 1119 aaKnown RBP16.83■□□□□ 0.28
SMG1-203ENST00000532700 ZDHHC24Q6UX98 284 aa16.83■□□□□ 0.28
SMG1-203ENST00000532700 NDUFAF7Q7L592 441 aa16.83■□□□□ 0.28
SMG1-203ENST00000532700 PALM2Q8IXS6 379 aa16.83■□□□□ 0.28
SMG1-203ENST00000532700 MMGT1Q8N4V1 131 aa16.83■□□□□ 0.28
SMG1-203ENST00000532700 CEP112Q8N8E3 955 aa16.83■□□□□ 0.28
SMG1-203ENST00000532700 OR51Q1Q8NH59 317 aa16.83■□□□□ 0.28
SMG1-203ENST00000532700 PPP4R1Q8TF05 950 aa16.83■□□□□ 0.28
SMG1-203ENST00000532700 SLC13A3Q8WWT9 602 aa16.83■□□□□ 0.28
SMG1-203ENST00000532700 CNDP1Q96KN2 507 aa16.83■□□□□ 0.28
SMG1-203ENST00000532700 IMMP1LQ96LU5 166 aa16.83■□□□□ 0.28
SMG1-203ENST00000532700 ZNF700Q9H0M5 742 aa16.83■□□□□ 0.28
SMG1-203ENST00000532700 PCBD2Q9H0N5 130 aa16.83■□□□□ 0.28
SMG1-203ENST00000532700 PTGFRNQ9P2B2 879 aa16.83■□□□□ 0.28
SMG1-203ENST00000532700 NAALAD2Q9Y3Q0 740 aa16.83■□□□□ 0.28
SMG1-203ENST00000532700 NBPF19A0A087WUL8 3843 aa16.83■□□□□ 0.28
SMG1-203ENST00000532700 USP9YO00507 2555 aaPredicted RBP16.82■□□□□ 0.28
SMG1-203ENST00000532700 E2F3O00716 465 aa16.82■□□□□ 0.28
SMG1-203ENST00000532700 PHGDHO43175 533 aaKnown RBP16.82■□□□□ 0.28
SMG1-203ENST00000532700 OR1F1O43749 312 aa16.82■□□□□ 0.28
SMG1-203ENST00000532700 FAM155BO75949 473 aa16.82■□□□□ 0.28
SMG1-203ENST00000532700 IPO13O94829 963 aaKnown RBP16.82■□□□□ 0.28
SMG1-203ENST00000532700 SEC24DO94855 1032 aaPredicted RBP16.82■□□□□ 0.28
SMG1-203ENST00000532700 HIST1H2AGP0C0S8 130 aaPredicted RBP16.82■□□□□ 0.28
SMG1-203ENST00000532700 HIST1H2ADP20671 130 aa16.82■□□□□ 0.28
SMG1-203ENST00000532700 HRH2P25021 359 aa16.82■□□□□ 0.28
SMG1-203ENST00000532700 VARSP26640 1264 aaKnown RBP16.82■□□□□ 0.28
SMG1-203ENST00000532700 GDF5P43026 501 aa16.82■□□□□ 0.28
SMG1-203ENST00000532700 GLRBP48167 497 aa16.82■□□□□ 0.28
SMG1-203ENST00000532700 AP1S2P56377 157 aa16.82■□□□□ 0.28
SMG1-203ENST00000532700 MFAP5Q13361 173 aa16.82■□□□□ 0.28
SMG1-203ENST00000532700 THOC6Q86W42 341 aaKnown RBP16.82■□□□□ 0.28
SMG1-203ENST00000532700 HIST1H2AHQ96KK5 128 aa16.82■□□□□ 0.28
SMG1-203ENST00000532700 HIST1H2AJQ99878 128 aa16.82■□□□□ 0.28
SMG1-203ENST00000532700 H2AFJQ9BTM1 129 aa16.82■□□□□ 0.28
SMG1-203ENST00000532700 LRRC1Q9BTT6 524 aa16.82■□□□□ 0.28
SMG1-203ENST00000532700 SARGQ9BW04 601 aa16.82■□□□□ 0.28
SMG1-203ENST00000532700 RHOJQ9H4E5 214 aa16.82■□□□□ 0.28
SMG1-203ENST00000532700 LANCL2Q9NS86 450 aa16.82■□□□□ 0.28
SMG1-203ENST00000532700 HIVEP3Q5T1R4 2406 aa16.82■□□□□ 0.28
SMG1-203ENST00000532700 ESPL1Q14674 2120 aa16.82■□□□□ 0.28
SMG1-203ENST00000532700 TCRBV9S1A1TA0A576 114 aa16.81■□□□□ 0.28
SMG1-203ENST00000532700 H0YIG0 161 aa16.81■□□□□ 0.28
SMG1-203ENST00000532700 TXNDC9O14530 226 aa16.81■□□□□ 0.28
SMG1-203ENST00000532700 PRPF4O43172 522 aaKnown RBP eCLIP16.81■□□□□ 0.282e-7■■■□□ 16.3
SMG1-203ENST00000532700 NDUFS4O43181 175 aa16.81■□□□□ 0.28
SMG1-203ENST00000532700 PRAMEF4O60810 478 aa16.81■□□□□ 0.28
SMG1-203ENST00000532700 CDC123O75794 336 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms