RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 HKDC1Q2TB90 917 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 PRTGQ2VWP7 1150 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 ZNF470Q6ECI4 717 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 FBXO42Q6P3S6 717 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 MTFR2Q6P444 385 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 RPTNQ6XPR3 784 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 RIPOR1Q6ZS17 1223 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 C3orf62Q6ZUJ4 267 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 TRMT10CQ7L0Y3 403 aaKnown RBP9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 OTOAQ7RTW8 1153 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 GALNT7Q86SF2 657 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 SLC26A11Q86WA9 606 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 CILP2Q8IUL8 1156 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 CNTN4Q8IWV2 1026 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 AGGF1Q8N302 714 aaeCLIP9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 AMER3Q8N944 861 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 LRRN4CLQ8ND94 238 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 SUN3Q8TAQ9 357 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 MMABQ96EY8 250 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 PWWP2AQ96N64 755 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 FOPNLQ96NB1 174 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 P2RY12Q9H244 342 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 CCDC68Q9H2F9 335 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 SYNPO2LQ9H987 977 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 CHST11Q9NPF2 352 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 C14orf105Q9NVL8 296 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 ZFATQ9P243 1243 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 TXNDC16Q9P2K2 825 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 GNPTGQ9UJJ9 305 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 CORO1CQ9ULV4 474 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 CDC14AQ9UNH5 594 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 RUVBL1Q9Y265 456 aaKnown RBP9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 DNAJC13O75165 2243 aa9.08□□□□□ -0.96
TRAPPC4-206ENST00000525303 PHF3Q92576 2039 aaKnown RBP9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 KPNA5O15131 536 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 PRPF4O43172 522 aaKnown RBP eCLIP9.07□□□□□ -0.962e-7■■■■□ 24.1
TRAPPC4-206ENST00000525303 PRAMEF2O60811 474 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 VPS26AO75436 327 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 ESR1P03372 595 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 ANXA5P08758 320 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 RPS3P23396 243 aaKnown RBP eCLIP9.07□□□□□ -0.962e-8■■■■■ 45.7
TRAPPC4-206ENST00000525303 ARNTP27540 789 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 ECHS1P30084 290 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 SLC26A3P40879 764 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 EFNA3P52797 238 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 EMP3P54852 163 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 EIF3BP55884 814 aaKnown RBP9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 RBPJQ06330 500 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 ZNF33BQ06732 778 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 TSTA3Q13630 321 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 NAA25Q14CX7 972 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 FASTKD3Q14CZ7 662 aaKnown RBP9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 SYT16Q17RD7 645 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 HSP90AA5PQ58FG0 334 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 HP1BP3Q5SSJ5 553 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 ABHD17BQ5VST6 288 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 SUSD1Q6UWL2 747 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 NEK10Q6ZWH5 1172 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 IGDCC3Q8IVU1 814 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 ZC3H7AQ8IWR0 971 aaKnown RBP9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 CSNK1A1LQ8N752 337 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 DNAJB8Q8NHS0 232 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 MAGEC3Q8TD91 643 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 MVB12AQ96EY5 273 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 TRIM8Q9BZR9 551 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 TGIF2Q9GZN2 237 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 RNF32Q9H0A6 362 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 ZNF700Q9H0M5 742 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 ANKZF1Q9H8Y5 726 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 MRPS30Q9NP92 439 aaKnown RBP9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 MKKSQ9NPJ1 570 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 IARS2Q9NSE4 1012 aaKnown RBP9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 MOCS1Q9NZB8 636 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 SPATA7Q9P0W8 599 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 ITGB1BP2Q9UKP3 347 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 MKL2Q9ULH7 1088 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 ITPR3Q14573 2671 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 ZNF407Q9C0G0 2248 aa9.07□□□□□ -0.96
TRAPPC4-206ENST00000525303 A0A087WUV0 522 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC4-206ENST00000525303 LOC102723996A0A087X1L8 192 aa9.06□□□□□ -0.96
TRAPPC4-206ENST00000525303 A0A0A6YYC8 382 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC4-206ENST00000525303 IGKV1-8A0A0C4DH67 115 aa9.06□□□□□ -0.96
TRAPPC4-206ENST00000525303 I3L1I5 382 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC4-206ENST00000525303 FOXS1O43638 330 aa9.06□□□□□ -0.96
TRAPPC4-206ENST00000525303 SLC19A2O60779 497 aa9.06□□□□□ -0.96
TRAPPC4-206ENST00000525303 NIPSNAP2O75323 286 aa9.06□□□□□ -0.96
TRAPPC4-206ENST00000525303 WISP2O76076 250 aa9.06□□□□□ -0.96
TRAPPC4-206ENST00000525303 C8orf89P0DMQ9 161 aa9.06□□□□□ -0.96
TRAPPC4-206ENST00000525303 ICAM2P13598 275 aa9.06□□□□□ -0.96
TRAPPC4-206ENST00000525303 SSTR1P30872 391 aa9.06□□□□□ -0.96
TRAPPC4-206ENST00000525303 RPA3P35244 121 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC4-206ENST00000525303 SLC1A2P43004 574 aa9.06□□□□□ -0.96
TRAPPC4-206ENST00000525303 AP2B1P63010 937 aa9.06□□□□□ -0.96
TRAPPC4-206ENST00000525303 ADORA2A-AS1P86434 159 aa9.06□□□□□ -0.96
TRAPPC4-206ENST00000525303 MAT1AQ00266 395 aaKnown RBP9.06□□□□□ -0.96
TRAPPC4-206ENST00000525303 ERCC6LQ2NKX8 1250 aa9.06□□□□□ -0.96
TRAPPC4-206ENST00000525303 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.06□□□□□ -0.96
TRAPPC4-206ENST00000525303 CTSL3PQ5NE16 218 aa9.06□□□□□ -0.96
TRAPPC4-206ENST00000525303 EMBQ6PCB8 327 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms