RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 IRAK1BP1Q5VVH5 260 aa17.69■□□□□ 0.42
SPIDR-220ENST00000522900 TMEM205Q6UW68 189 aa17.69■□□□□ 0.42
SPIDR-220ENST00000522900 CTAGE6Q86UF2 777 aa17.69■□□□□ 0.42
SPIDR-220ENST00000522900 SPATA6LQ8N4H0 392 aa17.69■□□□□ 0.42
SPIDR-220ENST00000522900 NKAPQ8N5F7 415 aaKnown RBP17.69■□□□□ 0.42
SPIDR-220ENST00000522900 OR51Q1Q8NH59 317 aa17.69■□□□□ 0.42
SPIDR-220ENST00000522900 ATL1Q8WXF7 558 aa17.69■□□□□ 0.42
SPIDR-220ENST00000522900 PSMF1Q92530 271 aa17.69■□□□□ 0.42
SPIDR-220ENST00000522900 VPS39Q96JC1 886 aa17.69■□□□□ 0.42
SPIDR-220ENST00000522900 TSNARE1Q96NA8 513 aa17.69■□□□□ 0.42
SPIDR-220ENST00000522900 WDR77Q9BQA1 342 aaPredicted RBP17.69■□□□□ 0.42
SPIDR-220ENST00000522900 UNKQ9C0B0 810 aaKnown RBP17.69■□□□□ 0.42
SPIDR-220ENST00000522900 VN1R1Q9GZP7 353 aa17.69■□□□□ 0.42
SPIDR-220ENST00000522900 RHOJQ9H4E5 214 aa17.69■□□□□ 0.42
SPIDR-220ENST00000522900 NTNG1Q9Y2I2 539 aa17.69■□□□□ 0.42
SPIDR-220ENST00000522900 PRRC2CQ9Y520 2896 aaKnown RBP17.69■□□□□ 0.42
SPIDR-220ENST00000522900 MDC1Q14676 2089 aaKnown RBP17.68■□□□□ 0.42
SPIDR-220ENST00000522900 LOC102723996A0A087X1L8 192 aa17.68■□□□□ 0.42
SPIDR-220ENST00000522900 A0A1W2PQ72 361 aa17.68■□□□□ 0.42
SPIDR-220ENST00000522900 B3GALT4O96024 378 aa17.68■□□□□ 0.42
SPIDR-220ENST00000522900 PRR35P0CG20 571 aa17.68■□□□□ 0.42
SPIDR-220ENST00000522900 GRK3P35626 688 aa17.68■□□□□ 0.42
SPIDR-220ENST00000522900 GPX6P59796 221 aa17.68■□□□□ 0.42
SPIDR-220ENST00000522900 PCOLCEQ15113 449 aa17.68■□□□□ 0.42
SPIDR-220ENST00000522900 EIF2S3LQ2VIR3 472 aaKnown RBP17.68■□□□□ 0.42
SPIDR-220ENST00000522900 THOC6Q86W42 341 aaKnown RBP17.68■□□□□ 0.42
SPIDR-220ENST00000522900 KBTBD2Q8IY47 623 aa17.68■□□□□ 0.42
SPIDR-220ENST00000522900 CATSPER1Q8NEC5 780 aa17.68■□□□□ 0.42
SPIDR-220ENST00000522900 DNAJB14Q8TBM8 379 aa17.68■□□□□ 0.42
SPIDR-220ENST00000522900 CYTH2Q99418 400 aa17.68■□□□□ 0.42
SPIDR-220ENST00000522900 SARGQ9BW04 601 aa17.68■□□□□ 0.42
SPIDR-220ENST00000522900 ZNF700Q9H0M5 742 aa17.68■□□□□ 0.42
SPIDR-220ENST00000522900 PTGFRNQ9P2B2 879 aa17.68■□□□□ 0.42
SPIDR-220ENST00000522900 PCDHGA10Q9Y5H3 936 aa17.68■□□□□ 0.42
SPIDR-220ENST00000522900 IGHV3-20A0A0C4DH32 117 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 TRBC2A0A5B9 178 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 ZNF860A6NHJ4 632 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 NDC80O14777 642 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 RDH16O75452 317 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 C1QAP02745 245 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 XCR1P46094 333 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 MFAP5Q13361 173 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 CSHL1Q14406 222 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 TSNQ15631 228 aaKnown RBP17.67■□□□□ 0.42
SPIDR-220ENST00000522900 ISLR2Q6UXK2 745 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 C3orf62Q6ZUJ4 267 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 LANCL3Q6ZV70 420 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 OR5T3Q8NGG3 340 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 BRIX1Q8TDN6 353 aaKnown RBP17.67■□□□□ 0.42
SPIDR-220ENST00000522900 PPP4R1Q8TF05 950 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 SLC5A11Q8WWX8 675 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 ANKRD7Q92527 254 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 LMF1Q96S06 567 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 ANKHQ9HCJ1 492 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 GPAMQ9HCL2 828 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 NSMCE4AQ9NXX6 385 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 CTNNAL1Q9UBT7 734 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 SLC22A14Q9Y267 594 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 NAALAD2Q9Y3Q0 740 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 OARD1Q9Y530 152 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 COPG1Q9Y678 874 aaKnown RBP17.67■□□□□ 0.42
SPIDR-220ENST00000522900 SLC22A7Q9Y694 548 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 NUP210LQ5VU65 1888 aa17.67■□□□□ 0.42
SPIDR-220ENST00000522900 TCRBV9S1A1TA0A576 114 aa17.66■□□□□ 0.42
SPIDR-220ENST00000522900 EIF3HO15372 352 aaKnown RBP eCLIP17.66■□□□□ 0.42
SPIDR-220ENST00000522900 NDUFS4O43181 175 aa17.66■□□□□ 0.42
SPIDR-220ENST00000522900 SEMA7AO75326 666 aa17.66■□□□□ 0.42
SPIDR-220ENST00000522900 WISP3O95389 354 aaPredicted RBP17.66■□□□□ 0.42
SPIDR-220ENST00000522900 SERPINA7P05543 415 aa17.66■□□□□ 0.42
SPIDR-220ENST00000522900 SLC35G6P0C7Q6 338 aa17.66■□□□□ 0.42
SPIDR-220ENST00000522900 C8orf89P0DMQ9 161 aa17.66■□□□□ 0.42
SPIDR-220ENST00000522900 GDF5P43026 501 aa17.66■□□□□ 0.42
SPIDR-220ENST00000522900 PLTPP55058 493 aa17.66■□□□□ 0.42
SPIDR-220ENST00000522900 NR6A1Q15406 480 aa17.66■□□□□ 0.42
SPIDR-220ENST00000522900 MINDY4Q4G0A6 757 aa17.66■□□□□ 0.42
SPIDR-220ENST00000522900 MFSD4BQ5TF39 518 aa17.66■□□□□ 0.42
SPIDR-220ENST00000522900 SIRT6Q8N6T7 355 aa17.66■□□□□ 0.42
SPIDR-220ENST00000522900 ANKRD53Q8N9V6 530 aa17.66■□□□□ 0.42
SPIDR-220ENST00000522900 CNDP1Q96KN2 507 aa17.66■□□□□ 0.42
SPIDR-220ENST00000522900 IMMP1LQ96LU5 166 aa17.66■□□□□ 0.42
SPIDR-220ENST00000522900 EGFL8Q99944 293 aa17.66■□□□□ 0.42
SPIDR-220ENST00000522900 EPS8L2Q9H6S3 715 aa17.66■□□□□ 0.42
SPIDR-220ENST00000522900 PLA2G3Q9NZ20 509 aa17.66■□□□□ 0.42
SPIDR-220ENST00000522900 SHANK1Q9Y566 2161 aa17.66■□□□□ 0.42
SPIDR-220ENST00000522900 FAM159BA6NKW6 160 aa17.65■□□□□ 0.42
SPIDR-220ENST00000522900 PHGDHO43175 533 aaKnown RBP17.65■□□□□ 0.42
SPIDR-220ENST00000522900 CBX6O95503 412 aa17.65■□□□□ 0.42
SPIDR-220ENST00000522900 SERPIND1P05546 499 aa17.65■□□□□ 0.42
SPIDR-220ENST00000522900 ITGAMP11215 1152 aa17.65■□□□□ 0.42
SPIDR-220ENST00000522900 VARSP26640 1264 aaKnown RBP17.65■□□□□ 0.42
SPIDR-220ENST00000522900 SOX11P35716 441 aa17.65■□□□□ 0.42
SPIDR-220ENST00000522900 GMPRP36959 345 aa17.65■□□□□ 0.42
SPIDR-220ENST00000522900 SCTRP47872 440 aa17.65■□□□□ 0.42
SPIDR-220ENST00000522900 CDKL1Q00532 357 aa17.65■□□□□ 0.42
SPIDR-220ENST00000522900 POU4F1Q01851 419 aa17.65■□□□□ 0.42
SPIDR-220ENST00000522900 FHL5Q5TD97 284 aa17.65■□□□□ 0.42
SPIDR-220ENST00000522900 B3GNTL1Q67FW5 361 aaPredicted RBP17.65■□□□□ 0.42
SPIDR-220ENST00000522900 NXPE4Q6UWF7 544 aa17.65■□□□□ 0.42
SPIDR-220ENST00000522900 ZDHHC24Q6UX98 284 aa17.65■□□□□ 0.42
SPIDR-220ENST00000522900 CYS1Q717R9 158 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 596.9 ms