RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 DAPL1A0PJW8 107 aa13.4□□□□□ -0.27
SYNPO-205ENST00000522122 SLC15A1P46059 708 aa13.4□□□□□ -0.27
SYNPO-205ENST00000522122 APOFQ13790 326 aa13.4□□□□□ -0.27
SYNPO-205ENST00000522122 KCTD11Q693B1 232 aa13.4□□□□□ -0.27
SYNPO-205ENST00000522122 ADNP2Q6IQ32 1131 aa13.4□□□□□ -0.27
SYNPO-205ENST00000522122 SYVN1Q86TM6 617 aa13.4□□□□□ -0.27
SYNPO-205ENST00000522122 GPR135Q8IZ08 494 aa13.4□□□□□ -0.27
SYNPO-205ENST00000522122 LSMEM2Q8N112 164 aa13.4□□□□□ -0.27
SYNPO-205ENST00000522122 METTL25Q8N6Q8 603 aa13.4□□□□□ -0.27
SYNPO-205ENST00000522122 COX18Q8N8Q8 333 aa13.4□□□□□ -0.27
SYNPO-205ENST00000522122 OR10H5Q8NGA6 315 aa13.4□□□□□ -0.27
SYNPO-205ENST00000522122 NUS1Q96E22 293 aa13.4□□□□□ -0.27
SYNPO-205ENST00000522122 IFT27Q9BW83 186 aa13.4□□□□□ -0.27
SYNPO-205ENST00000522122 MARCH7Q9H992 704 aa13.4□□□□□ -0.27
SYNPO-205ENST00000522122 ADAP2Q9NPF8 381 aa13.4□□□□□ -0.27
SYNPO-205ENST00000522122 PRKAB1Q9Y478 270 aa13.4□□□□□ -0.27
SYNPO-205ENST00000522122 IQCMA0A1B0GVH7 501 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 SLC31A1O15431 190 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 OR1I1O60431 355 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 GSTM2P28161 218 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 SLC6A4P31645 630 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 SLC11A1P49279 550 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 RING1Q06587 406 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 ZNF630Q2M218 657 aaPredicted RBP13.39□□□□□ -0.27
SYNPO-205ENST00000522122 GPRC6AQ5T6X5 926 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 TUBA3EQ6PEY2 450 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 FAM43BQ6ZT52 329 aaPredicted RBP13.39□□□□□ -0.27
SYNPO-205ENST00000522122 ACVR1CQ8NER5 493 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 ZNF461Q8TAF7 563 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 RGMAQ96B86 450 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 RAB11FIP5Q9BXF6 653 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 MRPS30Q9NP92 439 aaKnown RBP13.39□□□□□ -0.27
SYNPO-205ENST00000522122 MARCH4Q9P2E8 410 aaPredicted RBP13.39□□□□□ -0.27
SYNPO-205ENST00000522122 CDC14AQ9UNH5 594 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 SLX4Q8IY92 1834 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 REM1O75628 298 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 VIPR1P32241 457 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 VITQ6UXI7 678 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 NCCRP1Q6ZVX7 275 aaPredicted RBP13.39□□□□□ -0.27
SYNPO-205ENST00000522122 GRPEL2Q8TAA5 225 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 SLC22A4Q9H015 551 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 PAK6Q9NQU5 681 aaPredicted RBP13.39□□□□□ -0.27
SYNPO-205ENST00000522122 TREX1Q9NSU2 369 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 ARVCFO00192 962 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 MAGEB3O15480 346 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 DFNA5O60443 496 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 PRAMEF12O95522 483 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 BCHEP06276 602 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 GSTM3P21266 225 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 AVPR1BP47901 424 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 ARFIP1P53367 373 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 SH3BP2P78314 561 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 OR4D1Q15615 310 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 EIPR1Q53HC9 387 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 C6orf141Q5SZD1 244 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 ATG9BQ674R7 924 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 CEACAM20Q6UY09 585 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 NFKBIDQ8NI38 313 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 ZFP3Q96NJ6 502 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 SOX17Q9H6I2 414 aaPredicted RBP13.39□□□□□ -0.27
SYNPO-205ENST00000522122 LRRC72A6NJI9 287 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 BOLA2-SMG1P6H3BVE0 249 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 ACOT8O14734 319 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 NFATC3Q12968 1075 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 IDNKQ5T6J7 187 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 KIAA1161Q6NSJ0 714 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 POMZP3Q6PJE2 187 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 GALNT7Q86SF2 657 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 ISCA2Q86U28 154 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 IFNL1Q8IU54 200 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 UCK2Q9BZX2 261 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 KCNH6Q9H252 994 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 PCDHGA10Q9Y5H3 936 aa13.39□□□□□ -0.27
SYNPO-205ENST00000522122 PHIPQ8WWQ0 1821 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 POP7O75817 140 aaKnown RBP13.38□□□□□ -0.27
SYNPO-205ENST00000522122 FGF4P08620 206 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 GJA1P17302 382 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 CAPN3P20807 821 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 SLC36A3Q495N2 470 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 CYBRD1Q53TN4 286 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 YIPF4Q9BSR8 244 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 GSDMCQ9BYG8 508 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 TMEM45AQ9NWC5 275 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 FBXL21Q9UKT6 434 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 TSTQ16762 297 aaKnown RBP13.38□□□□□ -0.27
SYNPO-205ENST00000522122 SLC25A24Q6NUK1 477 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 SLC22A16Q86VW1 577 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 ZFAND4Q86XD8 727 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 AQP11Q8NBQ7 271 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 AUTS2Q8WXX7 1259 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 IGSF8Q969P0 613 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 TMEM203Q969S6 136 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 OR51B5Q9H339 312 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 IL36AQ9UHA7 158 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 RNF6Q9Y252 685 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 ANKRD12Q6UB98 2062 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 MYH9P35579 1960 aaKnown RBP13.38□□□□□ -0.27
SYNPO-205ENST00000522122 PRAMEF33A0A0G2JMD5 474 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 C7orf72A4D263 438 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 ZNF195O14628 629 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms