RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 NHLRC2Q8NBF2 726 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 NUP37Q8NFH4 326 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 OR5T2Q8NGG2 359 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 DNASE1L2Q92874 299 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 MR1Q95460 341 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 ERO1AQ96HE7 468 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 C18orf12Q96KH6 178 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 AGAP3Q96P47 875 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 TRIM51Q9BSJ1 452 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 ALKBH7Q9BT30 221 aaPredicted RBP4.4□□□□□ -1.71
SKP1-208ENST00000521216 NACAP1Q9BZK3 213 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 GFRA4Q9GZZ7 299 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 RPF1Q9H9Y2 349 aaKnown RBP4.4□□□□□ -1.71
SKP1-208ENST00000521216 B3GAT2Q9NPZ5 323 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 DNAJB9Q9UBS3 223 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 AGTPBP1Q9UPW5 1226 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 MYH15Q9Y2K3 1946 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 NPHP3Q7Z494 1330 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 ARID2Q68CP9 1835 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 A0A1W2PRQ8 180 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 H7C423 109 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 SLC1A7O00341 560 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 PSMA7O14818 248 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 ST8SIA3O43173 380 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 KIF5CO60282 957 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 SIX3O95343 332 aaPredicted RBP4.39□□□□□ -1.71
SKP1-208ENST00000521216 RBMS1P29558 406 aaKnown RBP4.39□□□□□ -1.71
SKP1-208ENST00000521216 HUNKP57058 714 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 HILS1P60008 231 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 CYCSP99999 105 aaKnown RBP4.39□□□□□ -1.71
SKP1-208ENST00000521216 ROR1Q01973 937 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 SCARB2Q14108 478 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 FAM189A2Q15884 450 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 DUSP5Q16690 384 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 NHSL2Q5HYW2 709 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 HECTD3Q5T447 861 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 ZNF772Q68DY9 489 aaPredicted RBP4.39□□□□□ -1.71
SKP1-208ENST00000521216 MSANTD1Q6ZTZ1 278 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 LRRTM1Q86UE6 522 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 CATSPERDQ86XM0 798 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 KRTAP7-1Q8IUC3 87 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 UXS1Q8NBZ7 420 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 ATP8B4Q8TF62 1192 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 CORO2AQ92828 525 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 PARK7Q99497 189 aaKnown RBP4.39□□□□□ -1.71
SKP1-208ENST00000521216 FGFBP2Q9BYJ0 223 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 HOXD1Q9GZZ0 328 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 LSG1Q9H089 658 aaKnown RBP4.39□□□□□ -1.71
SKP1-208ENST00000521216 C10orf88Q9H8K7 445 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 TEX10Q9NXF1 929 aaPredicted RBP4.39□□□□□ -1.71
SKP1-208ENST00000521216 THEGQ9P2T0 379 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 POLKQ9UBT6 870 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 PILRBQ9UKJ0 227 aa4.39□□□□□ -1.71
SKP1-208ENST00000521216 YDJCA8MPS7 323 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 NPIPA3F8WFD2 350 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 IFIT3O14879 490 aaKnown RBP4.38□□□□□ -1.71
SKP1-208ENST00000521216 SAP30O75446 220 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 SORBS2O94875 1100 aaKnown RBP4.38□□□□□ -1.71
SKP1-208ENST00000521216 TRIM49P0CI25 452 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 TRIM49CP0CI26 452 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 DLATP10515 647 aaKnown RBP4.38□□□□□ -1.71
SKP1-208ENST00000521216 CD59P13987 128 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 CASTP20810 708 aaKnown RBP4.38□□□□□ -1.71
SKP1-208ENST00000521216 TIA1P31483 386 aaKnown RBP eCLIP4.38□□□□□ -1.712e-8■■■■□ 23.8
SKP1-208ENST00000521216 NPBWR1P48145 328 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 VEGFCP49767 419 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 DHODHQ02127 395 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 ABRQ12979 859 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 TRA2AQ13595 282 aaKnown RBP eCLIP4.38□□□□□ -1.71
SKP1-208ENST00000521216 FCN2Q15485 313 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 MTHFSDQ2M296 383 aaKnown RBP4.38□□□□□ -1.71
SKP1-208ENST00000521216 ALDH1L2Q3SY69 923 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 ZRANB3Q5FWF4 1079 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 ATP1A1-AS1Q5TC04 95 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 PRSS55Q6UWB4 352 aaPredicted RBP4.38□□□□□ -1.71
SKP1-208ENST00000521216 STXBP4Q6ZWJ1 553 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 C5orf24Q7Z6I8 188 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 KRT77Q7Z794 578 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 ZER1Q7Z7L7 766 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 MEX3DQ86XN8 651 aaKnown RBP4.38□□□□□ -1.71
SKP1-208ENST00000521216 CREBRFQ8IUR6 639 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 OR4D10Q8NGI6 311 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 MOCOSQ96EN8 888 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 SGF29Q96ES7 293 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 FAM218AQ96MZ4 157 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 ZNF300Q96RE9 604 aaPredicted RBP4.38□□□□□ -1.71
SKP1-208ENST00000521216 DPEP2Q9H4A9 486 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 MED20Q9H944 212 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 IARS2Q9NSE4 1012 aaKnown RBP4.38□□□□□ -1.71
SKP1-208ENST00000521216 NUDT4Q9NZJ9 180 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 SEPT10Q9P0V9 454 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 ASIC3Q9UHC3 531 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 FBXL4Q9UKA2 621 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 PLCL2Q9UPR0 1127 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 KLK4Q9Y5K2 254 aa4.38□□□□□ -1.71
SKP1-208ENST00000521216 KPNA7A9QM74 516 aa4.37□□□□□ -1.71
SKP1-208ENST00000521216 PGRMC2O15173 223 aa4.37□□□□□ -1.71
SKP1-208ENST00000521216 CTDSPLO15194 276 aa4.37□□□□□ -1.71
SKP1-208ENST00000521216 SURF4O15260 269 aa4.37□□□□□ -1.71
SKP1-208ENST00000521216 GOT1P17174 413 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms