RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 RPS26P62854 115 aaKnown RBP10.94□□□□□ -0.66
CLK4-206ENST00000520878 C16orf72Q14CZ0 275 aa10.94□□□□□ -0.66
CLK4-206ENST00000520878 KIAA0040Q15053 153 aa10.94□□□□□ -0.66
CLK4-206ENST00000520878 DPY19L1Q2PZI1 675 aa10.94□□□□□ -0.66
CLK4-206ENST00000520878 NHSL2Q5HYW2 709 aa10.94□□□□□ -0.66
CLK4-206ENST00000520878 ATG9BQ674R7 924 aa10.94□□□□□ -0.66
CLK4-206ENST00000520878 GRHL2Q6ISB3 625 aa10.94□□□□□ -0.66
CLK4-206ENST00000520878 C8orf82Q6P1X6 216 aaPredicted RBP10.94□□□□□ -0.66
CLK4-206ENST00000520878 PARM1Q6UWI2 310 aa10.94□□□□□ -0.66
CLK4-206ENST00000520878 PTRH1Q86Y79 214 aaKnown RBP10.94□□□□□ -0.66
CLK4-206ENST00000520878 GALNT13Q8IUC8 556 aa10.94□□□□□ -0.66
CLK4-206ENST00000520878 TMEM145Q8NBT3 493 aa10.94□□□□□ -0.66
CLK4-206ENST00000520878 OTUB1Q96FW1 271 aaPredicted RBP10.94□□□□□ -0.66
CLK4-206ENST00000520878 NLNQ9BYT8 704 aa10.94□□□□□ -0.66
CLK4-206ENST00000520878 PAIP1Q9H074 479 aaKnown RBP10.94□□□□□ -0.66
CLK4-206ENST00000520878 KLHL25Q9H0H3 589 aa10.94□□□□□ -0.66
CLK4-206ENST00000520878 CARS2Q9HA77 564 aaKnown RBP10.94□□□□□ -0.66
CLK4-206ENST00000520878 CAPN10Q9HC96 672 aa10.94□□□□□ -0.66
CLK4-206ENST00000520878 SLC23A2Q9UGH3 650 aa10.94□□□□□ -0.66
CLK4-206ENST00000520878 CNOT11Q9UKZ1 510 aaKnown RBP10.94□□□□□ -0.66
CLK4-206ENST00000520878 A0A1W2PRB8 838 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 AHCYL1O43865 530 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 MITFO75030 526 aaPredicted RBP10.93□□□□□ -0.66
CLK4-206ENST00000520878 FABP3P05413 133 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 IL3P08700 152 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 PABPC4LP0CB38 370 aaKnown RBP10.93□□□□□ -0.66
CLK4-206ENST00000520878 ETFAP13804 333 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 NPPBP16860 134 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 IGFBP5P24593 272 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 ALDH3A2P51648 485 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 KCNAB2Q13303 367 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 VMACQ2NL98 169 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 SPIN4Q56A73 249 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 NXPE4Q6UWF7 544 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 THAP5Q7Z6K1 395 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 PACRGLQ8N7B6 248 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 C11orf65Q8NCR3 313 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 HSH2DQ96JZ2 352 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 TMEM121BQ9BXQ6 578 aaPredicted RBP10.93□□□□□ -0.66
CLK4-206ENST00000520878 AMBNQ9NP70 447 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 SLC52A3Q9NQ40 469 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 IFT80Q9P2H3 777 aaPredicted RBP10.93□□□□□ -0.66
CLK4-206ENST00000520878 RSL24D1Q9UHA3 163 aaKnown RBP10.93□□□□□ -0.66
CLK4-206ENST00000520878 BLOC1S6Q9UL45 172 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 CDH7Q9ULB5 785 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 CHD7Q9P2D1 2997 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 TRPM6Q9BX84 2022 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 M0QX08 132 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 KDELR2P33947 212 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 TRPC1P48995 793 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 SLC14A1Q13336 389 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 WSCD2Q2TBF2 565 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 KCTD8Q6ZWB6 473 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 P3H2Q8IVL5 708 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 DCUN1D3Q8IWE4 304 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 PLPP6Q8IY26 295 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 NAGSQ8N159 534 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 C10orf111Q8N326 155 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 TMIEQ8NEW7 156 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 OR10G6Q8NH81 332 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 BBS4Q96RK4 519 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 RBM4BQ9BQ04 359 aaKnown RBP10.93□□□□□ -0.66
CLK4-206ENST00000520878 RBM4Q9BWF3 364 aaKnown RBP10.93□□□□□ -0.66
CLK4-206ENST00000520878 MCOLN1Q9GZU1 580 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 ARMC7Q9H6L4 198 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 MBNL1Q9NR56 388 aaKnown RBP10.93□□□□□ -0.66
CLK4-206ENST00000520878 CUEDC1Q9NWM3 386 aaPredicted RBP10.93□□□□□ -0.66
CLK4-206ENST00000520878 SH2B3Q9UQQ2 575 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 GMPPBQ9Y5P6 360 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 COMMD3-BMI1R4GMX3 469 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 CACNB4O00305 520 aaPredicted RBP10.93□□□□□ -0.66
CLK4-206ENST00000520878 CCNDBP1O95273 360 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 EIF2S1P05198 315 aaKnown RBP10.93□□□□□ -0.66
CLK4-206ENST00000520878 CDH2P19022 906 aaPredicted RBP10.93□□□□□ -0.66
CLK4-206ENST00000520878 IDSP22304 550 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 LSM3P62310 102 aaKnown RBP10.93□□□□□ -0.66
CLK4-206ENST00000520878 ZNF763Q0D2J5 394 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 METTL2BQ6P1Q9 378 aaKnown RBP10.93□□□□□ -0.66
CLK4-206ENST00000520878 PNCKQ6P2M8 343 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 SLCO4C1Q6ZQN7 724 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 NEK10Q6ZWH5 1172 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 R3HCC1LQ7Z5L2 792 aaKnown RBP10.93□□□□□ -0.66
CLK4-206ENST00000520878 HMGN2P46Q86SG4 172 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 FAM129CQ86XR2 697 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 TRIM48Q8IWZ4 208 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 MSRB3Q8IXL7 192 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 XAGE5Q8WWM1 108 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 SAMD11Q96NU1 681 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 OLAHQ9NV23 265 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 FAM120CQ9NX05 1096 aaKnown RBP10.93□□□□□ -0.66
CLK4-206ENST00000520878 CA5BQ9Y2D0 317 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 YBX2Q9Y2T7 364 aaKnown RBP10.93□□□□□ -0.66
CLK4-206ENST00000520878 PLEKHM1Q9Y4G2 1056 aa10.93□□□□□ -0.66
CLK4-206ENST00000520878 ZFC3H1O60293 1989 aaKnown RBP10.92□□□□□ -0.66
CLK4-206ENST00000520878 HOXB2P14652 356 aa10.92□□□□□ -0.66
CLK4-206ENST00000520878 CXCR2P25025 360 aa10.92□□□□□ -0.66
CLK4-206ENST00000520878 MAPK9P45984 424 aa10.92□□□□□ -0.66
CLK4-206ENST00000520878 GALK1P51570 392 aa10.92□□□□□ -0.66
CLK4-206ENST00000520878 CDK3Q00526 305 aa10.92□□□□□ -0.66
CLK4-206ENST00000520878 ENPP7Q6UWV6 458 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms